Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1478 ATGATGGAATTACCAGAAATTTGGGTATTGAGACTGGTTGTGGCAAGTGCTGTTTGTCTGCATATATTTATCAGATCAGTTTCTGGCTTTGCAACTGAAGGGTTTGAAAACATAGCATGTTGTGCTGATTCAAATTACACAGATCCACAGACCACCTTAAACTACACAACAGATTACTCATGGTTCCCTGACAGAGGAAGCTGCAGAAGACCTAAAATTGGGTTGAATGAAAAAGTTCGACTGTTTTCTATAGATGAAGGAAAAAGATGTTACAATTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTTGACAGTGTAAATTCTTCCTTTAATGTTTCAATTGGGGTAACACAATTAGGTGCAGTGAGACCATCCACGCCCCAGGACTTTGAGATTGAGGGAGTTTTTAGGGCTACCAAAGACAACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCAGCTGGAATTAAGGCCATTGCCTGAAGATTACCTCTCAGAGGATTTGCCTGCCAGTGTTTTAAAATTGATAAGCAGAAATAGTCTTTGGGGCACAAAAGATGAAATCAGGTTCCCAAATGACCCAAGTGATAGAATGTGGAAAGCAACTTCAAGTCCACCATCTGCTCTCCTATTGTCTTACAATGTTAGCAATTTTGACCTCAAGTCCAACATGACACCACCTCTACAAGTTCTACAAACTGCTCTTACCCACCCTGAGAGATTGGAGATCCAGAGTAGCCTTGACACTGAGGATTATGAATATCGTGTCTTTCTCTACTTCCTTGAATTAAATAGCACTGTCAAAGAAGGAAAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTCAACGGGAGAAATTTGACATATTGGCTAGAGGGTCCAACTATACATACACTGTCTTGAACGTTTCAGCAAATGGTTCACTTAATTTAACCTTGGTCAAGGCATCTGGTGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCTTGCAAATGCGATCATGGATTGAAGAGACCAACCAAAAAGATGTGGAAGTGATTCAGAAGATTAGAGAAGAACTGTTGTTGCAAAACCAAAACAAAAAAGTGCTAGAGAGTTGGACTGGAGACCCTTGTATTTTCCCCTGGCACGGAATAGAGTGTGATGGTTCAAATGGCTCGTCTGTTATCACCAAGCTGGATCTTTCCTCAAGTAATTTCAAAGGACCAATTCCTTCTACTGTTACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAATTTCAATGGTTATATTCCCTCGTTTCCACCGTCCTCCTTGTTGACATCAATAGATCTAAGCTACAATGATCTTATGGGGTCACTTCCAGAATCAATTGCCTCACTGCCATATTTAAAATCTTTGTATTTTGGCTGCAACAAACGCATGAGCGAATACACTCCAGCTAATTTGAATGGTTCACTGATCAATACAGATTACGGAAGATGCAAAGCAAAAGAACCTAGATTTGGACAAGTATTTGTCATTGGTGCTATTACATGTGGATCACTTTTGATCACAGTGGCAGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACATTGATAGGGGAAGGAGGATTTGGTTCTGTTTACCGGGGCACTCTAAATGACGGTCAAGAAGTGGCAGTGAAAGTCCGTTCAGCCACATCAACGCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAAAACCTAGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTCGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTCCATACATTTCCAGGACGTTCAGTAATACATAGGGACGTAAAATCAAGCAATATACTTCTAGATCATAGCATGTGCGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAAGAAGGTGACAGTAACGTTTCTCTTGAAGTCAGAGGAACTGCAGGGTACCTGGATCCTGAATACTACAAAACCCAACAATTATCGGAGAAGAGTGATGTCTTCAGCTATGGCGTGGTTTTACTTGAAATTGTGACTGGTAGGGAACCTCTTGACATAAAGAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAGCCATATATAAGAGCATCAAAGATGGAAGAAATTGTGGATCCTGGCATCAAGGGGGCATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAGTGTCTTGAACCATTCTCAGCATATAGACCAAACATGGTGGACATTGTCCGTGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCCATTGACAGCCTTGGAGGATCAAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTCATCAACAGCAGAATCAACCATCACCACACAAGCCTTGTCCCATCCACAGCCGAGATAG 2760 0.4094 MMELPEIWVLRLVVASAVCLHIFIRSVSGFATEGFENIACCADSNYTDPQTTLNYTTDYSWFPDRGSCRRPKIGLNEKVRLFSIDEGKRCYNLPTIKNKVYLIRGTFPFDSVNSSFNVSIGVTQLGAVRPSTPQDFEIEGVFRATKDNIDFCLVKGEVDPFISQLELRPLPEDYLSEDLPASVLKLISRNSLWGTKDEIRFPNDPSDRMWKATSSPPSALLLSYNVSNFDLKSNMTPPLQVLQTALTHPERLEIQSSLDTEDYEYRVFLYFLELNSTVKEGKRVFDIYVNGEIQREKFDILARGSNYTYTVLNVSANGSLNLTLVKASGAEFGPLLNAYEILQMRSWIEETNQKDVEVIQKIREELLLQNQNKKVLESWTGDPCIFPWHGIECDGSNGSSVITKLDLSSSNFKGPIPSTVTEMTNLKILNLSHNNFNGYIPSFPPSSLLTSIDLSYNDLMGSLPESIASLPYLKSLYFGCNKRMSEYTPANLNGSLINTDYGRCKAKEPRFGQVFVIGAITCGSLLITVAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSYGVVLLEIVTGREPLDIKRPRNEWSLVEWAKPYIRASKMEEIVDPGIKGAYHAEAMWRVVEVALQCLEPFSAYRPNMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1478 919 SUPERFAMILY L domain-like 373 485 - -
Pvu2g1478 919 Gene3D Transferase(Phosphotransferase) domain 1 666 879 - -
Pvu2g1478 919 Gene3D Ribonuclease Inhibitor 352 502 IPR032675 -
Pvu2g1478 919 PANTHER OS05G0525400 PROTEIN 78 880 - -
Pvu2g1478 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Pvu2g1478 919 Pfam Protein tyrosine and serine/threonine kinase 594 862 IPR001245 GO:0004672|GO:0006468
Pvu2g1478 919 Pfam Malectin-like domain 42 343 IPR024788 -
Pvu2g1478 919 SMART serkin_6 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1478 919 Gene3D Phosphorylase Kinase; domain 1 562 665 - -
Pvu2g1478 919 CDD STKc_IRAK 596 863 - -
Pvu2g1478 919 SUPERFAMILY Protein kinase-like (PK-like) 571 862 IPR011009 -
Pvu2g1478 919 PANTHER OS07G0107800 PROTEIN-RELATED 78 880 - -
Pvu2g1478 919 ProSiteProfiles Protein kinase domain profile. 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1478 919 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Pvu2g1478 919 Gene3D - 195 345 - -
Pvu2g1478 919 Pfam Leucine rich repeat 402 459 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1478 Pvu-Chr2 27926771 27936729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1478 35 869 Receptor kinase-like Gene Family AT1G67720 33.943 6.56e-131 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu2g1478 Malectin_like 1.3e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1478 - - gmx:100781986 1665.97