Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1449 ATGGCAATTGAAAACCATGACACCACTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGAGGACAATAGGTGGCCACCATGGTTGAAGCCACTTCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACACGCTGATTCTCACAAGAGTGAATGCAACATGTATTGCCTGGACTGTATGAACGGCCCACTCTGCTCTCTCTGTCTCGCCCACCACAAGGATCACCGTGCAATCCAGATCAGGAGGTCCTCATACCATGATGTGATCAGGGTTTCTGAGATTCAGAAGGTGTTGGACATCACTGGCGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTGTTTTTGAACGAGAGGCCTCAGCCAAGGCCAGGAAAAGGGGTCACAAACACTTGTGAAGTCTGCGAGCGAAGTCTTCTTGATTCTTACCGCTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAGCCCCCAGAAGAAGAAGAAGCCGTCAACGGCAATGTCATCAGATTCTGAGGATTCATACAGCAGCAACAGCGTCCATGGCCTGCAGAAGAACTGCAAAGTTCAGAGCTTCACACCATCCACACCACCTCCTACTTCGGTTAATTACAGAACTGCCAAGAGAAGAAAGGGAATACCACACCGAGCCCCAATGGGGGGACTAATCATAGAATATTAG 711 0.4824 MAIENHDTTVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKSPQKKKKPSTAMSSDSEDSYSSNSVHGLQKNCKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1449 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 232 - -
Pvu2g1449 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
Pvu2g1449 236 MobiDBLite consensus disorder prediction 167 213 - -
Pvu2g1449 236 MobiDBLite consensus disorder prediction 164 225 - -
Pvu2g1449 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1449 Pvu-Chr2 27475937 27478512 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu2g1449 PLATZ 7.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1449 - - gmx:100797900 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1449 2 27475937 27478512 Pvu2g1449 2 27475937 27478512 ECH
Pvu2g1449 2 27475937 27478512 Pvu3g2931 3 51096112 51098333 PCT