Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1445 ATGCAAACAAACCACTATGTCTTCATCGAAATCAAAGCAGAGAACTCCTCCCAAGTGCTACCGCCGCCTCCACCGTCGGAAATCACCCCGTCGACTATAGTATTCTTCTCCATCGCAGTGGCCGTCTTCTGCTCCGTTGGTTTCACCGTCGTCTTCTTCTGCAGGTGCTGTTTCGGGAACCTCTCCCGCACTAGCACCCTCGTCCGTCTCTCTCCCCATGCTTCTCCCTACCGAGGCCTCGACCCTTCTCTGCTGAGCGCGTTCCCCACGTTCCTCTACGCCACCGTGAAGGATCTCCGGAAGAAGAAGAAGTACTCCCTCGAATGCGCCATTTGCTTGCTGGAGTTCGACGACGACAGCGTGCTGCGTGTCTTAACCGGGTGCTGCCACGTGTTCCACCGGGAGTGCATCGACCTGTGGCTCCGGTCGCACAAGACTTGCCCCGTTTGCCGCACGGATCTCGAGACACCGGCGAGTAACGTGCAGAAACCTCACGAGCAAAACGAGGAGAATATGGAACAAGAGAGGATCGATCACGTGAGCGTTGATGTGAAAGAAGAAGATGGAGATGAGAGAGATAATGATGGTGATGAGGTAGGTTTGATGAATGTGGGCATGCAGCGAAACATGTTTGCAAGTGCACGTTCTCACTCAACTGGTCATTCCATAGTTATGGTTAGAGAAGGAGATAAAGGAAGAGATGATGATGATAATAAATACACTCTGAGATTGCCCCAACATGTTAAAATTGTAAGAGGTCATCATTACTCTAACAGTTGTTCAACTTACAAAGACATGGCAAGGCGTTCTGCACCTTGTAGTAACTGTGGTTATGTTAAACTTGGTAGCCCCAGTAATATGGTCTAA 867 0.504 MQTNHYVFIEIKAENSSQVLPPPPPSEITPSTIVFFSIAVAVFCSVGFTVVFFCRCCFGNLSRTSTLVRLSPHASPYRGLDPSLLSAFPTFLYATVKDLRKKKKYSLECAICLLEFDDDSVLRVLTGCCHVFHRECIDLWLRSHKTCPVCRTDLETPASNVQKPHEQNEENMEQERIDHVSVDVKEEDGDERDNDGDEVGLMNVGMQRNMFASARSHSTGHSIVMVREGDKGRDDDDNKYTLRLPQHVKIVRGHHYSNSCSTYKDMARRSAPCSNCGYVKLGSPSNMV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1445 288 PANTHER RING FINGER DOMAIN-CONTAINING 17 260 - -
Pvu2g1445 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 158 IPR013083 -
Pvu2g1445 288 CDD RING-H2_PA-TM-RING 108 151 - -
Pvu2g1445 288 Pfam Ring finger domain 108 151 IPR001841 -
Pvu2g1445 288 PANTHER RING-H2 FINGER PROTEIN ATL29 17 260 - -
Pvu2g1445 288 SMART ring_2 109 150 IPR001841 -
Pvu2g1445 288 SUPERFAMILY RING/U-box 102 160 - -
Pvu2g1445 288 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1445 Pvu-Chr2 27429793 27430916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1445 13 249 Rapid Response to Elicitors AT3G05200 35.341 9.63e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1445 - - vra:106776743 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1445 2 27429793 27430916 Pvu3g2926 3 51041739 51042650 PCT