Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1426 ATGACATTGGTTATCAGAGAGAGAAGACACAAGCAAGCTCTAAGCCTTTCATTACCAAAATCTCCTTCGATTTCAATTCCATCACATTCAGATTTCCCTCACCAAATCCACGTACCAGCACTGCTCACATCCCCGTCTTCCCATGTAGACTCTTCTCCAGGCATTATCAAGGACCTTTCGGACCTTGAGAAGCTTTCAGTTCTTGGCCATGGCAATGGTGGCACAGTCTACAAAGTTTATCACAACAGTAGCCGCTCCTTCTATGCCTTGAAAGTGCTACGCTTGAATGAGAACGATCTTGGCATTCGAAAACCCGCTACACTAGAGGCAGAGATTCTGAAGCGAGTGGATTCACCATATATAGTAAGGTGTCATGCAGTTTTTGAGAATGGTTATAGCAATAACAATGATGGTGACAAGGGAGGTGACATTAGGTTTGTTATGGAATACATGGAAGGAGGGTCGTTGCATGATGTGTTGAGAGAGCATCATAGACTGCCAGAAGAGGTTATCTGTGTTTTGGCAAGGCGTGTTTTGGAAGGACTTGGGTATCTACATGGCATGAACATTGTGCATAGAGATATTAAACCATCAAACTTACTTGTGAATGAAAAAGGGGAGGTAAAGATTGCAGATTTTGGAGTGAGTCATGTGGTGGAAGGTAGGTTTGAAGGAAATGAGTATGATGCAGGGACTTGTGCTTACATGAGTCCAGAAAGGATTGATCCAGAAAGATGGGGTGGTGAGAATGCAGATGAGTTTGCAGGAGATGTGTGGTCAATGGGAGTGGTGATGTTGGAATGTCTTTTGGGTTATTTTCCATTGATTGGTGCAGGGCAGAGAGCAGATTGGGCAACTTTGATGTGTGCAATTTGCTTTGGTGAGAAGCTGGAGATGCCAGAAAAAGCATCTCCAGAGTTTCAAAATTTTGTGAGGAGATGTCTTGAGAAGAATTGGAGGAAGAGAGCAACAGTATTAGAACTTCTCCACCACCCTTTTCTCACTCCAAAATTCCGTTGCTCTTAG 1026 0.4357 MTLVIRERRHKQALSLSLPKSPSISIPSHSDFPHQIHVPALLTSPSSHVDSSPGIIKDLSDLEKLSVLGHGNGGTVYKVYHNSSRSFYALKVLRLNENDLGIRKPATLEAEILKRVDSPYIVRCHAVFENGYSNNNDGDKGGDIRFVMEYMEGGSLHDVLREHHRLPEEVICVLARRVLEGLGYLHGMNIVHRDIKPSNLLVNEKGEVKIADFGVSHVVEGRFEGNEYDAGTCAYMSPERIDPERWGGENADEFAGDVWSMGVVMLECLLGYFPLIGAGQRADWATLMCAICFGEKLEMPEKASPEFQNFVRRCLEKNWRKRATVLELLHHPFLTPKFRCS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1426 341 SMART serkin_6 62 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1426 341 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 5 337 - -
Pvu2g1426 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Pvu2g1426 341 CDD PKc_MAPKK_plant_like 60 335 - -
Pvu2g1426 341 Gene3D Transferase(Phosphotransferase) domain 1 149 340 - -
Pvu2g1426 341 Pfam Protein kinase domain 63 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1426 341 ProSiteProfiles CRIB domain profile. 24 39 IPR000095 -
Pvu2g1426 341 Gene3D Phosphorylase Kinase; domain 1 46 148 - -
Pvu2g1426 341 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 337 IPR045269 GO:0004674|GO:0006914
Pvu2g1426 341 ProSiteProfiles Protein kinase domain profile. 62 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1426 341 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Pvu2g1426 341 SUPERFAMILY Protein kinase-like (PK-like) 60 335 IPR011009 -
Pvu2g1426 341 PRINTS Tyrosine kinase catalytic domain signature 148 161 IPR001245 GO:0004672|GO:0006468
Pvu2g1426 341 PRINTS Tyrosine kinase catalytic domain signature 184 202 IPR001245 GO:0004672|GO:0006468
Pvu2g1426 341 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1426 Pvu-Chr2 27119115 27120140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1426 1 334 MAP Kinase Kinase Gene Family AT1G32320 51.796 1.42e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pvu2g1426 Pkinase 5.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1426 K20604 - gmx:100817973 543.117