Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1415 ATGGAGCTTTTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCGAACACCAAACCAACATCAAGTTGGAGGAGAAGCACAGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCCTTGGACTCCAGAAACTCCATATCATCAATGGCCAAACAAGACTCTTGCGTCGCCCTCTCCCTCTCCAATCCAAAAGCCTCAGATAACTCCAACTCCTCTAACCTCATTCACCACTTCCAAAACGTTGCCAATAATGCCACCACCAACCCCTTCCAACCCTTTCAGCAGAACCATTACTTCCACCAGCCACTGTTCCAGCCTCAGCACCAAAGCTTAAGCCAAGACCTCGGCTTTCTCAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACTCAACACCACCACCACCACCATCATCTCCCTCTAGAGCCTTCAACCACCACCCCTTCTTCTATTATTTCCACCACAAACACTGCTTCTACCCCTTTCCACTCTCAGGCCCTTATGAGATCAAGGTTCTTGTCACGCTTCCCTGCCAAGCGTAGCATGAGGGCTCCCAGGATGCGTTGGACTTCCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAACTCTTAGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTGAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCCGCGGCTTCATCAGGGCAATCGGATGTGTATGATAATGGGTCGTCTGGAGATACTTCTGATGACTTAGTGTTTGATGTAAAATCTTCTACAAGGTCTGATGTATCCATTAAACAGGGAAGATCAAGTGTTAATCAAGATAAGGAGTATCATGGTCTTTGGGGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGACTGATTCTGTTGGAAACGTGCCTTCTCTTGAGAAGGAAATGGATCCGAAGTGTCTAAGCTATGAGAGAATATCAGATGGAAGCTCATCCTCAAATGTTTCGGGATCAAGCCAGAAGAAGCCTAATTTGGATTTGGAATTCAGCTTGGGGCAGCCACTTTAA 1122 0.4724 MELFPAQPDLSLQISPPNTKPTSSWRRSTEEDMDLGFWKRALDSRNSISSMAKQDSCVALSLSNPKASDNSNSSNLIHHFQNVANNATTNPFQPFQQNHYFHQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHHHHHLPLEPSTTTPSSIISTTNTASTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLVFDVKSSTRSDVSIKQGRSSVNQDKEYHGLWGNSSREAWLHGKTKTDSVGNVPSLEKEMDPKCLSYERISDGSSSSNVSGSSQKKPNLDLEFSLGQPL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1415 373 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 372 - -
Pvu2g1415 373 MobiDBLite consensus disorder prediction 136 158 - -
Pvu2g1415 373 MobiDBLite consensus disorder prediction 343 364 - -
Pvu2g1415 373 MobiDBLite consensus disorder prediction 318 373 - -
Pvu2g1415 373 Gene3D - 192 249 - -
Pvu2g1415 373 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 372 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pvu2g1415 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 193 246 IPR006447 GO:0003677
Pvu2g1415 373 SUPERFAMILY Homeodomain-like 190 246 IPR009057 -
Pvu2g1415 373 MobiDBLite consensus disorder prediction 251 276 - -
Pvu2g1415 373 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1415 Pvu-Chr2 27029191 27034429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1415 1 372 G2-like Transcription Factor Family AT4G17695 39.340 3.32e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu2g1415 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1415 - - gmx:100798081 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1415 2 27029191 27034429 Pvu2g1415 2 27029191 27034429 ECH
Pvu2g1415 2 27029191 27034429 Pvu3g2912 3 50915374 50921578 PCT