Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1402 ATGGCACCACCACCAACGGACTCAGAACCAGAATCCGAGGCGCTGCGGCTCAAGGCAATGGCGGAGTCCAAGTTCAAAGCTTCCAAAAACGCCAAATCCGCTCTCAAATACGCGAAGCGCGCGCAGCGGTTGTGTCCGCACCTCGCCGGCGTGTCGGAAGCCGTCACCTCGCTCACCGTTCTCGCCGCACCGGACTGGTACAGTGCCCTCGGCGCGGAGCCCTTTGCAAACAGCGGCGTCATTCGGAAACAGTACAAGAAGCTCGCACTGCTCCTTCACCCCGACAAGAATCCCAACGTGGCGTCCGAGGAGGCCTTCAAGCACGTCGGCGAGGCATTCCACTTCCTTTCCGACCGGAGTCTCCGCCGAGAGTACGACGCCGAGCTCCGACGGAAGATCAAGGCAGAGAGCGAGACGTTCTGGACCGCGTGCTCCACTTGCAGGCTCCTTCACCAGTTCCAGAGAAAGTATATGGGTCATGAATTGGTGTGTCCGAGTTGTGAGAAGAGTTTTAAGGCTGTGGAAACGGTTCAGAGTGATGGGGATGCTGATGGGGAAGGTAGGGTTAGGAGTAGGAGGTTGAAGTTGAAAGAGATAAATAAGAAAAAGGAGAATATTGGTGTGAAAGGGAAAGTGGATAATGAAGTGGGGGATGAGAAGGAAGGGAGATTGAGGAAGAGAATGCGTTCAGTTGGGGAGGTGTTGGAGAGGTCGAAACCTGGTAAGAGGGTTAAAAATGGGGAGGAAATGATGACATTAGCTGAATTTCAGAATGAGGTGAGGAGAAAGTTGCAAGGAAAAAAGTTGAAGGAAAAAGAAAAGGAAAAGGAGGAGCATATAATTGAGAAGACGAGCAACAGGCGGTCGATGCGGCGGGGATTGAACTCTGAAGGTTTAGAGGTTGGAGAGGTGAGGCCTTTGAAGAAGAGTGTGAGGCTTGCAATTGAGGAGAAGCGTGGAGGTTTAGAGAAGAAGAAGGGATTGAGATTTGAGGAGCATAGGGATTCTGATGAAGGGGAGTTGGGAAATATGGTGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAGAAGAGCTTTAAGAAAGGTCAAGTGTGGGCAGTGTATGACGATGATGATGGAATGCCAAGGAATTATGCCTTGATTGATGGAACTCTTTCAGTGAATCCTTTTGAAGTGAAATTAAGTTGGTTGGATGTACAGATCAGTGGGGATGGGAGGATAGTCAGTAGGGAGAAAATGGGGTTTCATATACCTTGTGGGAGATTTAAGGTTGCCAGGAAGACTTCGGTGAATTCGGTAAATATATTTTCCCATGTTGTGGATTGTGACCGGGCAGCACGTGAGCTTTACAAAATTTACCCCAAGAAAGGGTCGGTATGGGCGCTTCATGGCGAGGGAAGTATTGATGCAGAGGAGGGAAAGAGGTGCTATGACATTGTTGTATGTCTGACAAGTTACAATGAGGTGAATGGTCTGAGCATGGCATATCTGGAGAAGGTTGATGGTTACAAGACAGTATTTAGGCGGCAAGAGAAGGGGAGTGGTGCTATTAGATTTCTTGGGAAGGATGACTTGTGGTTAGTTTCTCATCAGATTCCTGCACGGAAGCTTATTTGTGATGAAACGCCTGAGCTGCTGAAAGACTGTTGGGAACTCGATCCCGCTTCACTTCCTTCAGATTTACTTACTATTGCTGGCATTGATAATTGA 1722 0.4872 MAPPPTDSEPESEALRLKAMAESKFKASKNAKSALKYAKRAQRLCPHLAGVSEAVTSLTVLAAPDWYSALGAEPFANSGVIRKQYKKLALLLHPDKNPNVASEEAFKHVGEAFHFLSDRSLRREYDAELRRKIKAESETFWTACSTCRLLHQFQRKYMGHELVCPSCEKSFKAVETVQSDGDADGEGRVRSRRLKLKEINKKKENIGVKGKVDNEVGDEKEGRLRKRMRSVGEVLERSKPGKRVKNGEEMMTLAEFQNEVRRKLQGKKLKEKEKEKEEHIIEKTSNRRSMRRGLNSEGLEVGEVRPLKKSVRLAIEEKRGGLEKKKGLRFEEHRDSDEGELGNMVVVDSDFYDFDKDRVEKSFKKGQVWAVYDDDDGMPRNYALIDGTLSVNPFEVKLSWLDVQISGDGRIVSREKMGFHIPCGRFKVARKTSVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALHGEGSIDAEEGKRCYDIVVCLTSYNEVNGLSMAYLEKVDGYKTVFRRQEKGSGAIRFLGKDDLWLVSHQIPARKLICDETPELLKDCWELDPASLPSDLLTIAGIDN* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1402 573 SMART dnaj_3 64 121 IPR001623 -
Pvu2g1402 573 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Pvu2g1402 573 PRINTS DnaJ domain signature 67 85 IPR001623 -
Pvu2g1402 573 PRINTS DnaJ domain signature 85 100 IPR001623 -
Pvu2g1402 573 PRINTS DnaJ domain signature 101 121 IPR001623 -
Pvu2g1402 573 Coils Coil 267 287 - -
Pvu2g1402 573 CDD DnaJ 65 118 IPR001623 -
Pvu2g1402 573 Gene3D DnaJ domain 52 147 IPR036869 -
Pvu2g1402 573 Pfam DnaJ domain 65 126 IPR001623 -
Pvu2g1402 573 Pfam Domain of unknown function (DUF3444) 344 542 IPR024593 -
Pvu2g1402 573 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 11 569 - -
Pvu2g1402 573 PANTHER BNAC03G44070D PROTEIN 11 569 - -
Pvu2g1402 573 SUPERFAMILY Chaperone J-domain 57 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1402 Pvu-Chr2 26812403 26814518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1402 7 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.034 2.60e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1402 - - gmx:100813361 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2768 3 49524102 49527349 Pvu2g1402 2 26812403 26814518 PCT