Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1401 ATGGGCAGCAGCGAGATGGACAAAACTCCAAAAGAGAAGGAGTCAAAGACGCCACCACCTACGTCACAGGAGCAGTCTTCAACCACGGCTACTGGAACAATTAATCCTGATTGGCCTGGATTCCAGGCATATTCTCCTATACCTCCACACGGTTTCTTGGCATCAAGTCCACAGGCTCACCCTTATATGTGGGGTGTCCAGCAATTTATGCCTCCTTATGGTACTCCACCACATCCATATGTTGCAATGTATCCCCCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGCCCATTTGCTATGCCTTCTCCAAATGGCATTGCTGAGGCTTCAGGAAACACTCCTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATTAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACAGGGAAAAATAATGAACATGGTAAAACAACAGGCACATCTGCTAATGGAATTCATTCAAAGAGTGGTGATAGTGCAAGTGAAGGGGAAGGCACCAGTGAAGGAAGTGATGCAAATTCTCAAAATGACTCTCAAATGAAATCAGGGGGCAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGGACTTCAGCATATACTTCTCAAAATGGGGGCATAAGTACGCCAGCTACAGTGGTCAATCAGAATGTGCCTATCATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTACACCGGCTCCTTCCAACATTCCTGCACTTGGCAGAAAGGTACCATCTACTGCAGTTGCTGGATCACGGGATAGTGTTCAATCACAACTCTGGCTACAGGATGAAAGAGAGATTAAAAGGCAAAGGCGAAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGTAAGCAGGCCGAGTGTGATGAGTTAGCTCAGCGTGCTGAGGCTTTGAAGGAAGAGAATGCCTCTCTCCGGTCAGAAGTAAGTCGAATCAGGAGTGATTATGAGCAGCTACTTTCAGAGAACACTGCTCTCAAGGAAAGACTTGGGGAACTACCTGCGAATGATCAACATGTGGGTAATGAGGCTCAACAGAATGGACAGACAGAAGGTGTGCAAGGTGGTCATTAG 1194 0.4657 MGSSEMDKTPKEKESKTPPPTSQEQSSTTATGTINPDWPGFQAYSPIPPHGFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTTGTSANGIHSKSGDSASEGEGTSEGSDANSQNDSQMKSGGRQDSFEDEPSQNGTSAYTSQNGGISTPATVVNQNVPIIPISAGGAPGAVPGPTTNLNIGMDYWGTPAPSNIPALGRKVPSTAVAGSRDSVQSQLWLQDEREIKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSDYEQLLSENTALKERLGELPANDQHVGNEAQQNGQTEGVQGGH* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1401 397 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 397 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pvu2g1401 397 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Pvu2g1401 397 Gene3D - 304 358 - -
Pvu2g1401 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 366 IPR004827 GO:0003700|GO:0006355
Pvu2g1401 397 SUPERFAMILY Leucine zipper domain 304 360 IPR046347 GO:0003700|GO:0006355
Pvu2g1401 397 MobiDBLite consensus disorder prediction 304 327 - -
Pvu2g1401 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Pvu2g1401 397 MobiDBLite consensus disorder prediction 146 230 - -
Pvu2g1401 397 Pfam bZIP transcription factor 301 363 IPR004827 GO:0003700|GO:0006355
Pvu2g1401 397 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Pvu2g1401 397 MobiDBLite consensus disorder prediction 1 18 - -
Pvu2g1401 397 Pfam Disordered region downstream of MFMR 135 274 - -
Pvu2g1401 397 MobiDBLite consensus disorder prediction 1 45 - -
Pvu2g1401 397 MobiDBLite consensus disorder prediction 112 230 - -
Pvu2g1401 397 MobiDBLite consensus disorder prediction 379 397 - -
Pvu2g1401 397 MobiDBLite consensus disorder prediction 19 38 - -
Pvu2g1401 397 MobiDBLite consensus disorder prediction 367 397 - -
Pvu2g1401 397 CDD bZIP_plant_GBF1 306 356 IPR045314 GO:0003700|GO:0006355
Pvu2g1401 397 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 397 - -
Pvu2g1401 397 Coils Coil 321 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1401 Pvu-Chr2 26797730 26810044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1401 1 374 bZIP Transcription Factor Family AT2G35530 64.416 3.31e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu2g1401 MFMR_assoc 2.9e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1401 K09060 - gmx:100101882 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1401 2 26797730 26810044 Pvu2g1401 2 26797730 26810044 ECH
Pvu2g1401 2 26797730 26810044 Pvu3g2818 3 49963099 49970518 PCT