Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1374 ATGGCAGATAGTTCAGTATCGTTTTTACTGGAAAAGTTGGATTCTTTACTTCAGGAAGAAGTGAATCTGCAGAGAGGGGTTCGTGAAGATGTTCAGCACATCAAATATGAACTTGAACGTCACAAGGCCATCTTAAGGATGGCTGATGCTATGGAGGACAAAGACCCTGAACTCAAAGCATGGGTCAAACGAGTGAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTCAACCTTCGCCTTGTTGATCAACATGGACAAGGCAACAATTCTTCTCTTCATAGGTTTATTTTCGGCCTTAAGACCATGAAAGCTCGGAGAAGAATTGCTTTAGATATGCAAAGTATCAAATGCAAAGTGAACGTTATATCCCAGGGACGTCCTGAGTTACCTGGGCTAGGGTCGAGGTCAAGTCAACGGCTTTCATCAAGGCTTGATAGCCAAGGAGATGCACTTCTGCTAGAAGAAGCTGATCTGGTGGGTATTGACAAACCCAAAAGGCAGATTTGTGATTTGCTTTTCAATGAAGAACTGGGTAGGGCTGTGATTCCAATTTATGGAATGGGAGGGTTGGGGAAAACCACCCTGGCAAAGCAGGTCTATGATGATCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGATCAATGTTTCACAGTCTTTTAAGCTACAAGAGCTCCTTAAAGACCTGGTTCAGCAGCTCCATAATGTCATTGGCAAACCAGCTCCGGAAGCAGTTGGGCAAATGAAAAGTGAGGGGCTCAAAGAGATGATCAAGAACTTGCTTCAGAGCAGCAGGTACCTAATTGTGCTGGATGATGTGTGGCATGTGAGGGTATGGGACTCTGTCAAACTTGCTTTGCCTAATAGCAACCGTGGAAGTAGAGTGATGGTTACAACACGCAAAAAAGATATAGCTTTGTATTCTTGTGCTGAACTGGGTAAGGATTTTAACCTTGATTTCTTACCTGAGGAAGAAGCTTGGTATCTTTTCTGCAAGAAAACATTTCAGGGTAACTCGTGTCCTCCTCATCTGGAGGAGGTTTGCAGGAAGATCTTAAAAATGTGTGGTGGGTTGCCACTAGCAATTGTGGCAATTGGTGGTGCTTTGGCTACGAAAGGGAGGGCAAACATTGAAGAGTGGCAGATGGTTTGCAGAAGTTTTGGGTCTGAAATTGAAGGCAATGACAAACTGGGGGATATGAATAAAGTGCTTTCCCTAAGTTTCAATGAGTTGCCTTACTATCTTAAATCCTGTTTGTTGTACCTAAATATCTTCCCTGAGTTTCATGCAATTGAGCACATGAGACTAATTCGCTTGTGGATTGCTGAAGGTTTTGTGAATGGAGAAGATGGAAAGACAAGGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGCCTGCTGCAAGTTGTAGCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGTATGCATGATCTTCTAAGGGAGATTGTGAATTTGAAGGCAAAGGATCAAAACTTTGCAACAATAGCCAAAGATCAAGACATAATCTGGCCAGACAAAGTTCGACGCCTGTCAATCATAAATACATTGCATAATGTGCAAAAAAATAGAGCTTCATTCCAACTCCGGTCTCTGCTACTGTTTGACTTATCAGATTCACTGGATAATTTTTCTATACGTGCATTATGTTCCACTGGTTACAAGTTAATCAGGGTCTTAGATTTGCAGGATACACCTTTGGAGGTTTTTCCTGCTGAAATTTTCAGCCTTTACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTACCATTAAGAAGCTGCAGCAGCTGGAGACTCTAGATCTTAAACAAACCCTTGTCACTGTATTGCCAGTTGAAATTGTGGAGCTGCAACAATTACGCCATCTCTTGGTGTATCGCTATGAGATTGAATCTTATGCTTATTTCCATTCAAGGCACGGCTTCAAGGTGGCTGCCCCTATAGGACTCATGAAATCTTTGCAAAAGCTATGCTTTATAGAGGCAGACCAGGCTTTGATGGTTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATTAGAAAGATGAGGCAACAAGATGGTGCTGCTCTGTGTTCATCCATTGAGAAGATGATCAATCTCCGCTCACTGTCCATCACAGCAATTGAAGATTATGAGATCATTGATATTCACAACATCTTCAGGCCTCCTCCCTATCTCCAGCAGTTATACTTGAGTGGACGTTTAGACACTTTTCCCCACTGGATTAGTTCTCTTAAGAATTTGGTGCGAGTGTTTCTAAAATGGAGTCGGCTAAGAGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAATCTGAGACATCTCGAGTTTCTTCAAGTTTATGTAGGTGAGACATTGAATTTCAAGGCAAAAGGGTTCCCAAGTCTGAAGGTGTTAGGCCTTGATGATTTAGATGAACTGAAATGTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATAATCCAGCGCTGTGGTTCACTGAAGCAGGTACCCTTAGGCATTGAACATCTAACAAAACTAAAATCAATTGAGTTTTTTGACATGCCTGGAGAATTGATCACAAGACTTTCAAGTGGAGGTGAGGATTATTTGAGAGCACAACATGTCCCAGCACTTTATTCCTCGTATTGGAGGGATGGAGGTTGGGATGTCTACTCATTAGAGACTTTAGGGGAGCGAGAGACTGATTTCAGTCGCAGTACTGCAATGAGAAGTCTTGAAAATTGTACTCTCTGGAAGGTTTAA 2826 0.4253 MADSSVSFLLEKLDSLLQEEVNLQRGVREDVQHIKYELERHKAILRMADAMEDKDPELKAWVKRVRDVAHDMEDAIDEFNLRLVDQHGQGNNSSLHRFIFGLKTMKARRRIALDMQSIKCKVNVISQGRPELPGLGSRSSQRLSSRLDSQGDALLLEEADLVGIDKPKRQICDLLFNEELGRAVIPIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWINVSQSFKLQELLKDLVQQLHNVIGKPAPEAVGQMKSEGLKEMIKNLLQSSRYLIVLDDVWHVRVWDSVKLALPNSNRGSRVMVTTRKKDIALYSCAELGKDFNLDFLPEEEAWYLFCKKTFQGNSCPPHLEEVCRKILKMCGGLPLAIVAIGGALATKGRANIEEWQMVCRSFGSEIEGNDKLGDMNKVLSLSFNELPYYLKSCLLYLNIFPEFHAIEHMRLIRLWIAEGFVNGEDGKTREEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLREIVNLKAKDQNFATIAKDQDIIWPDKVRRLSIINTLHNVQKNRASFQLRSLLLFDLSDSLDNFSIRALCSTGYKLIRVLDLQDTPLEVFPAEIFSLYLLKYLSLKNTKVKSIPGTIKKLQQLETLDLKQTLVTVLPVEIVELQQLRHLLVYRYEIESYAYFHSRHGFKVAAPIGLMKSLQKLCFIEADQALMVELGKLTQLRRLGIRKMRQQDGAALCSSIEKMINLRSLSITAIEDYEIIDIHNIFRPPPYLQQLYLSGRLDTFPHWISSLKNLVRVFLKWSRLREDPLVHLQDLPNLRHLEFLQVYVGETLNFKAKGFPSLKVLGLDDLDELKCMTVEEGAMPGLKKLIIQRCGSLKQVPLGIEHLTKLKSIEFFDMPGELITRLSSGGEDYLRAQHVPALYSSYWRDGGWDVYSLETLGERETDFSRSTAMRSLENCTLWKV* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1374 941 Pfam Rx N-terminal domain 6 93 IPR041118 -
Pvu2g1374 941 Pfam Leucine rich repeat 573 626 IPR001611 GO:0005515
Pvu2g1374 941 Gene3D - 5 112 - -
Pvu2g1374 941 Gene3D - 153 314 IPR027417 -
Pvu2g1374 941 Gene3D - 412 502 IPR036388 -
Pvu2g1374 941 SUPERFAMILY L domain-like 490 876 - -
Pvu2g1374 941 CDD RX-CC_like 2 126 IPR038005 -
Pvu2g1374 941 Gene3D Ribonuclease Inhibitor 552 680 IPR032675 -
Pvu2g1374 941 Gene3D Ribonuclease Inhibitor 681 878 IPR032675 -
Pvu2g1374 941 Pfam NB-ARC domain 166 413 IPR002182 GO:0043531
Pvu2g1374 941 Gene3D - 324 411 IPR042197 -
Pvu2g1374 941 PRINTS Disease resistance protein signature 184 199 - -
Pvu2g1374 941 PRINTS Disease resistance protein signature 264 278 - -
Pvu2g1374 941 PRINTS Disease resistance protein signature 359 373 - -
Pvu2g1374 941 PRINTS Disease resistance protein signature 613 629 - -
Pvu2g1374 941 PANTHER OS08G0539900 PROTEIN 1 127 - -
Pvu2g1374 941 PANTHER OS08G0539900 PROTEIN 154 900 - -
Pvu2g1374 941 PANTHER DISEASE RESISTANCE PROTEIN RP 1 127 IPR044974 GO:0006952
Pvu2g1374 941 PANTHER DISEASE RESISTANCE PROTEIN RP 154 900 IPR044974 GO:0006952
Pvu2g1374 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1374 Pvu-Chr2 26437427 26440702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1374 162 378 WRKY Transcription Factor Family AT5G45050 28.111 2.77e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1374 K13457 - gmx:100305458 1610.12