Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1371 ATGGCAGCTTGCACTGTGTACTCAACACAATCTCTGAGCACAAATTGCTCCATCTCAACCCCATCAAAAACACAATTCAGTTTTCACCAAAAGCAGGTAGTATTCTACACCACAGGCAGAAGGAACAGCAAGAGGGGCAGCAACAGTGGCAGAAGCTATGTGATAACATGTGCAGCAAGTGACCAACAGACAGTGGTGATAGGTCTGGCAGCTGACTCAGGGTGTGGAAAGAGTACCTTCATGAGGAGGCTGACCAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAGGGTGGGAACCCTGATTCCAACACTCTCATCAGTGACACCACCACAGTCATATGCTTGGATGATTACCACTCATTGGATAGAACTGGCAGAAAGGAGAAGGGAGTCACTGCCCTTGACCCAAGAGCCAACGATTTTGATCTCATGTATGAGCAAGTTAAAGCAATCAAGGATGGAATTTCTGTTGAAAAGCCAATCTACAACCATGTCACTGGTCTCTTGGATCCCCCTGAACTCATTAAACCTCCCAAAATCTTAGTCATTGAAGGTTTGCACCCAATGTTTGATTCCCGTGTCAGAGACCTCTTGGACTTTAGCATCTACCTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGACATAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGAAAGCCTGATTTTGAAGCATACATTGATCCACAAAAGCAATATGCAGATGCTGTGATAGAAGTGTTGCCAACTCAACTTATTCCAGATGACAATGAGGGTAAGATTTTAAGAGTGAGGTTGATACAGAAAGAGGGAGTTAAGAACTTCAGTCCAGTCTACTTGTTTGATGATGGCTCTACCATTTCATGGATACCATGTGGAAGGAAGCTTACATGCTCCTACCCTGGCATCAAATTCTCCTATGGACCAGACACTTACTACGGAAATGAGGTGTCAATTGTAGAAATGGATGGACAATTTGACAGATTAGATGAACTAATATATGTTGAGAGTCACCTAAGCAACCTCTCTACCAAGTTCTATGGAGAGGTTACTCAGCAGATGTTGAAGCATGCTGATTTCCCCGGCAGCAACAATGGGACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATCTATATGAACAGATAATAGCCAGCAGGGCTGAGACTCCAGTAGCTGCAAAAGCTTAG 1230 0.4423 MAACTVYSTQSLSTNCSISTPSKTQFSFHQKQVVFYTTGRRNSKRGSNSGRSYVITCAASDQQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKDGISVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKNFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFSYGPDTYYGNEVSIVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIASRAETPVAAKA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1371 409 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Pvu2g1371 409 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pvu2g1371 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 334 IPR027417 -
Pvu2g1371 409 PANTHER URIDINE KINASE 6 408 - -
Pvu2g1371 409 CDD PRK 66 355 - -
Pvu2g1371 409 Gene3D - 61 299 IPR027417 -
Pvu2g1371 409 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pvu2g1371 409 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pvu2g1371 409 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pvu2g1371 409 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pvu2g1371 409 PANTHER PHOSPHORIBULOKINASE 6 408 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1371 118 292 PRT Gene Family AT3G27440 25.843 1.06e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1371 K00855 - gmx:100777515 772.696