Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1365 ATGGAGGGTGGAGGAAGAGAAAGTTATAATGGAGTGGTGATGACTATGACACGAGACCCGAAGCCAAGGCTAAGATGGACAACAGATCTTCATGATCGCTTTGTGGATGCAGTCACAAAGCTTGGTGGCCCCGATAAGGCGACTCCGAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGTCTGACACTATATCATTTGAAGAGCCATTTACAGAAGTACAGACTTGGACAGCAGGCTCGAAAACAAAATGAGGAACTGAACAAAGAGAATAGTAGATGTTCGTTTGTAAATTTTAGTAACCGTTCTTCAGGGCCTAACACCAGTTACAGAGGTGATAATGAAGGGGGAGAGATCCCGATAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGACCAGCTCGAGGTACAGAAGAAGTTGCAGATGCGAATAGAGGCTCAAGGGAAGTATTTGCAAGCAGTGTTAGAGAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAAGTCTTGAAGCATCAAGAGCTCAGTTGACAGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACTGATTTTTATAATAAGAATCATGGCTCAGATTTCCATTATGAGGAAGTAGGGAGAGAACAAAATAGGGATCAAAAGCCCAAGATTGAAGGGGGTTCAATAGAGTTTGACTTGAACATTAAGGGTAGCAATGATCTTGTATCTGCAGGTGGGGCTGAAATGGATGTCAATATGATTTCATACAGGGGGTAA 810 0.4198 MEGGGRESYNGVVMTMTRDPKPRLRWTTDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENSRCSFVNFSNRSSGPNTSYRGDNEGGEIPIAEALRHQIEVQKRLEDQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGSLEASRAQLTEFNSALSNFMENMNKDSKENIIEVTDFYNKNHGSDFHYEEVGREQNRDQKPKIEGGSIEFDLNIKGSNDLVSAGGAEMDVNMISYRG* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1365 269 Pfam MYB-CC type transfactor, LHEQLE motif 119 165 IPR025756 -
Pvu2g1365 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 255 - -
Pvu2g1365 269 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Pvu2g1365 269 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Pvu2g1365 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 255 IPR044848 GO:0003700
Pvu2g1365 269 SUPERFAMILY Homeodomain-like 21 78 IPR009057 -
Pvu2g1365 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Pvu2g1365 269 Gene3D - 20 78 - -
Pvu2g1365 269 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1365 Pvu-Chr2 26336787 26339659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1365 12 190 G2-like Transcription Factor Family AT3G24120 54.545 1.79e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu2g1365 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1365 - - gmx:100810146 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1365 2 26336787 26339659 Pvu2g1365 2 26336787 26339659 ECH