Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1357 ATGAGTGTTCCTCCGCCGTCTACGGCGGCGATGTGGACGCCCTTCACGGCGGCCCAATGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGGCTCTCCGTTCCCCCTGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAATTCATGGCACACCCATCTCTTGGGGGGTACTACGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCCGGAGAACCGATGGGAAGAAGTGGAGGTGTTCGAGGGATGCTCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCACTCTTCTTCTGCTTCTTCAAACCCTGTTGCTGCTTCTGCTTCATCTGCAACTGGTTCTGCTGCTTCCTCTGGAACTGCTTCTGCTGCTGCATCTGCTACAACACTCAACACCCTTCCCTTGCATACCAATGGAGCTCGGGAGGGTTTCACATTCACCCTTGGGAACAGCGCCACCTCTGCCACCCCCACCCTCCCGCACCTTCACATGGACCCCCTCACTCTTTCAGGTGACAATACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCTGATGAGCACGTCTTACAGAAAGATCTGGGAAGTGTGAGGTATCAAGGTTATGACTTCACCTCAGACAGCATGTGGTCTCATATGTCTCCAATTCCATCAAATACTGTTTCGGAATCAAGAAGTGGTTCTACCATGCTGGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCCGATCTGTTGAACCTGGAAACTGCAAGGACCAAAGACCTTATGTTTAGTAGCCAGTTAAGTTCAGCAGGGAGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCGATTGAGTATAGACCCAACAAGGATTTCAACTGCAATCCAGATGTCAATGTTGATTAA 996 0.5131 MSVPPPSTAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQFMAHPSLGGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPHSSSASSNPVAASASSATGSAASSGTASAAASATTLNTLPLHTNGAREGFTFTLGNSATSATPTLPHLHMDPLTLSGDNTKKTYRFGLNSEADEHVLQKDLGSVRYQGYDFTSDSMWSHMSPIPSNTVSESRSGSTMLGNCFQQQTMRDADLLNLETARTKDLMFSSQLSSAGSLKQEYQSPQSLFSDWDWKKDLSSSAIEYRPNKDFNCNPDVNVD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1357 331 Pfam WRC 69 111 IPR014977 -
Pvu2g1357 331 MobiDBLite consensus disorder prediction 68 137 - -
Pvu2g1357 331 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Pvu2g1357 331 PANTHER - 1 331 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu2g1357 331 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu2g1357 331 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu2g1357 331 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu2g1357 331 MobiDBLite consensus disorder prediction 111 137 - -
Pvu2g1357 331 MobiDBLite consensus disorder prediction 68 98 - -
Pvu2g1357 331 PANTHER GROWTH-REGULATING FACTOR 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1357 Pvu-Chr2 26271039 26274860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1357 14 111 GRF Transcription Factor Family AT3G13960 59.633 6.47e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu2g1357 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1357 - - gmx:100777524 535.798