Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1355 ATGTTTACATGCATAGCGTGTACGAAGCAAACGGCGGAGGAGGGGGAAGAAGGTGGTGAGAGTGGCACGTCGAGTACAAAAGAAGTTGTCAAAAGCCTGAGTGCGCAGTTAAAGGATATGGTACTGAAGTTTTCAGGTTCATACAAGCAGTGCAGACCTTGCACAGGGTCCAGTACCTACAAGAAAGGACAGAGGCCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCCTATATTGGAGGAGCAAGCTCAACTTCAACCCCTGCTTGGGACTTCACAAGCTCCTATTTCCCTGGTGGTAGATCAGACCAAAGATTTATGGGGGGGTTCAGTGGTGATAGGACCTCTAGAGGACCTGATTCAGCACCAGCATGTGATGTACTTGTTGAGGAAGAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCAGGGGTTCACATTACCTTTGTGTCTCTTCCCAGAGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTTGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTACAATGTCCAGAGATTCAATCGACAAGCTCTTAACACTCCTTCCAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGACTGACATCTGGACAAGAAAGCCCGGGGTCGATGTCGTTGAAGGAATGGACACCAAGGAATCACTATAAGCCCTCATTGAATAACCACTCTGAAGCTATGGATCACGGTGGTGGTCAAAACTTCCCTGCAGGGTCATCTGTGGAAGCATCAAGGACAACCACTTCTTCTAGAGATGAGCCTTCAATGAGCAATGCTAGTGACCTGGAGGCAGAATGGATAGAGCAAGATGAACCTGGAGTGTACATTACGATCAGGCAATTAGCTGATGGAACTAAGGAGCTTCGTCGTGTTAGATTCAGCCGGGAGAAATTTGGGGAGGGGCATGCAAAGAAATGGTGGGAAGACAACAGAGAAAGAATACAAGCTCAATACCTTTGA 1038 0.4692 MFTCIACTKQTAEEGEEGGESGTSSTKEVVKSLSAQLKDMVLKFSGSYKQCRPCTGSSTYKKGQRPYPDFDTISEGVPYPYIGGASSTSTPAWDFTSSYFPGGRSDQRFMGGFSGDRTSRGPDSAPACDVLVEEEDETKEWMAQVEPGVHITFVSLPRGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEQRDSSYSRLTSGQESPGSMSLKEWTPRNHYKPSLNNHSEAMDHGGGQNFPAGSSVEASRTTTSSRDEPSMSNASDLEAEWIEQDEPGVYITIRQLADGTKELRRVRFSREKFGEGHAKKWWEDNRERIQAQYL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1355 345 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Pvu2g1355 345 ProSiteProfiles BRX domain profile. 290 345 IPR013591 -
Pvu2g1355 345 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 345 IPR044532 -
Pvu2g1355 345 Pfam Transcription factor BRX N-terminal domain 22 54 IPR027988 -
Pvu2g1355 345 MobiDBLite consensus disorder prediction 218 234 - -
Pvu2g1355 345 MobiDBLite consensus disorder prediction 263 283 - -
Pvu2g1355 345 MobiDBLite consensus disorder prediction 203 286 - -
Pvu2g1355 345 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 345 - -
Pvu2g1355 345 Pfam Transcription factor regulating root and shoot growth via Pin3 289 344 IPR013591 -
Pvu2g1355 345 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1355 Pvu-Chr2 26250399 26257591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1355 1 345 Major Intrinsic Protein MIP AT1G31880 64.067 3.15e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1355 - - gmx:100809614 631.713