Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1354 ATGGAGAGGTACAACTTAATTAAGGAAGTTGGTGATGGGACGTTTGGGAGTGTCTGGAGAGCTATAAACAAACAAACTGGTGAAGTTGTTGCTATCAAGAAGATGAAGAAGAAGTATTACTCTTGGGAGGAGTGTGTAAACCTAAGAGAAGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTCAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTTTGTACTTTGTTTTTGAATACATGGAATGCAACCTATACCAGCTTATGAAAGATAGGGAAAAACTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGTGACCTGAAGCCTGAAAACTTGCTGGTTACCAAGGATATAATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATCACTTCACAACCACCTTACACTGAATATGTCTCCACACGATGGTACCGTGCACCTGAAGTGCTGCTTCAGTCTTATATGTATTCCTCTAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTTTTCTCTCTTCGTCCCCTTTTCCCAGGTGTCAGTGAAGCAGATGAGATATACAAAATATGTGGTGTGATTGGCAGTCCAACCTATGAATCTTGGGATGATGGACTCAAACTTGCAAGGGATATCAACTACCAATTCCCGCAGCTTGCCGGTGTGCATCTTTCTGCACTGATCCCGTCTGCAAGCGAGGATGCAATCAGTCTTATCACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCTGAGGCCCTTCAGCATCCTTTCTTTCAGAGTTGCTTCTATATTCCTCCATCCCTTCGAAGCAGAGCAGTAGCGAGAACTCCACCATCCGCTGGAACCAGAGGAGCACTGGATCAGCAAGGGGTCAAGAGATATCCCGGTGCTTTATCTTATTCAAAGATCACCAATCATTTTTCTTCCCAGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGGAAGCTGGATATGGTAAATCAGGATGGAATTAGGAATGAAAAACCTATGAGGAGTACTAAACCAAAGTATCGACAGCCAGGAAGGGACAGCCCAACTTCTATGAACAAGGGGAGGTCTGCACGTGGGATTTCAGAAACAGCTGAGAAATTGGGCAATTTGTCTGTTAGTGGTAGAAGACAATCAATGGGGCAAACCCGTCCTCCACCAATGAAAGCTGGAGTGAATTGGATTTCTGAATCTGGAAACTTCATCCTTGGGTCCGCCCAGCAGCAGATTCAGGCTGGAAGAACTTTCACCAGAAAAGTTGCCGGATGA 1356 0.4432 MERYNLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREITSQPPYTEYVSTRWYRAPEVLLQSYMYSSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICGVIGSPTYESWDDGLKLARDINYQFPQLAGVHLSALIPSASEDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRSRAVARTPPSAGTRGALDQQGVKRYPGALSYSKITNHFSSQKLHPPLASGVQRKLDMVNQDGIRNEKPMRSTKPKYRQPGRDSPTSMNKGRSARGISETAEKLGNLSVSGRRQSMGQTRPPPMKAGVNWISESGNFILGSAQQQIQAGRTFTRKVAG* 452
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1354 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1354 451 CDD STKc_MAK_like 4 283 - -
Pvu2g1354 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pvu2g1354 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 392 - -
Pvu2g1354 451 MobiDBLite consensus disorder prediction 372 387 - -
Pvu2g1354 451 MobiDBLite consensus disorder prediction 355 416 - -
Pvu2g1354 451 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Pvu2g1354 451 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Pvu2g1354 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Pvu2g1354 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1354 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1354 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Pvu2g1354 451 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 392 - -
Pvu2g1354 451 MobiDBLite consensus disorder prediction 355 371 - -
Pvu2g1354 451 MobiDBLite consensus disorder prediction 396 410 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu2g1354 Pvu-Chr2 26241690 26246738 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1354 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 1.91e-67 216
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pvu2g1354 Pkinase 6.5e-76 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1354 K08829 - gmx:100810150 849.736