Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1352 ATGGCCGAGGTTTTACTGGGAATCGTCATTGAAAATTTGGGATCTTTTGTTCAAAACCAACTTGCAACTTATTGGGGTGTTGACCAGCAGACTCAGAAGCTTTCCAGCAATCTCACTGCAATCCGTGCTGTCCTCAGAGATGCTGAGAAAAAGCAAATAACAAGCGAGGTCCTCAAGATTTGGCTGCAGAAACTCACAGATGCAGCATATGTACTGGATGATATCTTGGATGAATGTTCAATTCACTCCACAAAGATGCACTCTCATGATGGACATACTTCATGCCTATCCCCTCTCCATCCTAAGGACATTCTCTTTCGTTTTAATATTGGCAAGAGGATGAAAGACATCACCCAAAGATTTCATGACATTCATCAAGAAAAGAGCAGCTTTAATTTAGAACTTGGGGTCACCGAGGTGCAAACACTGGATGATGATTGGCGCCAAACTAGCTCTGACATTACAGAACCTACACTCTATGGCAGAGATCAGGATCGAGAGCAAATTGTTAAGTTTCTTGTGGAAGATGCGAGTAACAGTGAAGACCTCTCCGTCTATCCCATAGTTGGTATGGGTGGACTCGGCAAAACAACACTTGTCAAGCAGGTCTTCAATGATCACAGGGTATGCAAACACTTTGACTTGACAATTTGGGTCTGTGTTTCTGATGATTTCAACTCCAAGACAATACTACAATCCATCATAGAATGTTGCACTGGACAAAATCCCAATCTCAATACGTTAGAAGCAGTGCGGAAAAAGGTTGAAGAAGTGTTGCAAAACAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAGCAGTTGAAGGGGAAGTTGCAGTGTGCAAGGGCAGCAAAAGGAGCTACCATTTTGGTCACCACTCGACTGCAGGAAGTTGCTTCCACCATGGAGACGCATCCTGCTTACCATTTGACAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGGACAAAACAGAGAAGAAATAGAAGAGCTTGTGGCAATTGGCAGAGTGATAGTGAGAAGATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGTCTTTTGCGTGATAAAAGTGAGGTAAGCCAGTGGGAAAATGTAAAAGAAAGTGAGATTTGGAATATACGAGAGGAAAGTAGTTCTATGACATGTGAGGAAAATTCTATCATGCGTGCTTTGAAACTGAGCTATTCTAATTTGGAGTTGTCTCTGAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGTCAAGGAAGAACTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAACTTAGAAGTGGAGGATGTTGGAAATAAAGTGTGGAAAAAATTATACCGTAGATCATTTTTTCAAGAAGGAAAATCTGATAAGCTTGGTATGATTACAAGTTGCAAGATGCATGATCTATTTCATGATCTTGCCCAGTCTATTATGGGTGAAGAATGTGTGATTATTGAGAAAGGAAGGTTGACTCAGTTGCCAACTAGAGTTCACCATTTGCACATGTTAAATTATGATGCCTCTGTCAATATGGCTGCTTTCAAGAAAGTTGAATCCCTGCGGACTTTTCTGGATTTTGGTAATATTGGCCTGGTGCCATCAACCCATTGTCTCCGAGCATTATGCACAACTTCTTATTGGTTGTTCCCAGTCACAGATTTATCACATTTGAGATACTTGAGTTGGAATAGGGGTTCGGGAGAAGGCTTACGTAACATAATTTGTCAGTTGCCAAAATTGCAAATATTGAAACTGCAACAGCTCAATCAACTTAGGCTGCCCAAAGAATTGACGCAATTGCAAGATCTAAGACATATTGTGATTAATAATTGTGAGTCAATATCAGAGATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTGAGCACTTTCGTTGTGGGTTCAAAGGCAGGGTGTGGGTTATCAGAGTTGCATAGCTTAAAGCTGGGAGGCACACTGAGAATCCAAGGCCTTGAGAACGTCCCCAATGAATGTGATGCTAAACAAGCAAATTTGATTGGTAAGAAGGACTTGAATATCCTACACTTGTCATGGGGTGGTAGTGCTAATTCAGAAGGTAGTAATGTTAACATTGAGAGAATACTGGAAGCCCTGGAACCTCCCTCAAGTCTGAAAAGTTTTGGGATGAAAGGATATAAGGGGAGACAGTTATCGAGTTGGATAAGAAATGGTGCAGTTTTGAGAGACTTGGTGGAAGTTATACTCTTGGACTGTAACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACAGTTGAAAAGGCTAGAAGTGGGTGGAATGAAAAATGTGAAGTGGATAGATGGTGAGTCGTATGATGGTGTGGAGGAGAAGGCCTTTCCATCGTTGGAGGAATTGAGGGTGGAGAATTTACCAAGTTTGGAGAGGATGTTGAAGGAAGAAGGAGTAGAGATGCTACCTTGTCTTTCCGAATTAACAATTGTTGGCATGTCCAACCTTAAATTTCCACGTCTTCCTTCTGTTGGGAAGGTATCTATTTGCAAAGCGGCTTCCTTCATGGAAGGGGTTGTGAAGAATATGCCTTGTCTAAAGACCTTGGATATTGAAATGATTGAAGGACAAGTGGTATTACCCGACCAACCTAGCGGGTTGGGTTCACTACAGGAACTAATAATTTTTTCTTGTGATGATGTGGAGTATTTCCCAGAACATGTGTTGGAAGGCCTTACATCTCTTCGACGTTTAAGTATTTTATTCTGTGATAACTTTAAATCATTATCTGAAGGTGTGCGACATTTGACATGTCTGGAGATTTTGATTATCAGGTTTTGTTTAGAGATGGTGACTCTACCAACCAATATGAGCCAACTAACTGCCCTTCGGACTGTCACAATCGACCGTTGTTATACATTACCAAATGGCTTACAACGTGTCCCCTCCCTACGAACTTTGGAAATAAGCGGTTGCATGTCTACTTCATTGCCGGACTGGCTGGGAGACATGACTTCTCTTCAAAACTTATACATTTCGTACTGTGGAGAGTTGAGGTCACTACCGAGTAGCATTCAACGCCTCACCAACTTATCTTCTTTAACTTTATACGAATGTCCTTATCTGAAGAAGCGGTGCAAGAGGGAAACGGGAGAGGATTGGCAATACATAAAGCACATTCCAGAAATAGAACTGTTTTCCGAAACGACATTTTGTGGATTTTGCTAA 3282 0.4138 MAEVLLGIVIENLGSFVQNQLATYWGVDQQTQKLSSNLTAIRAVLRDAEKKQITSEVLKIWLQKLTDAAYVLDDILDECSIHSTKMHSHDGHTSCLSPLHPKDILFRFNIGKRMKDITQRFHDIHQEKSSFNLELGVTEVQTLDDDWRQTSSDITEPTLYGRDQDREQIVKFLVEDASNSEDLSVYPIVGMGGLGKTTLVKQVFNDHRVCKHFDLTIWVCVSDDFNSKTILQSIIECCTGQNPNLNTLEAVRKKVEEVLQNKRYLLVLDDVWNEDQEKWKQLKGKLQCARAAKGATILVTTRLQEVASTMETHPAYHLTELSGDDSWSLFKHHAFGQNREEIEELVAIGRVIVRRCVGSPLAIKTLGSLLRDKSEVSQWENVKESEIWNIREESSSMTCEENSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIVKEELIHLWMANGFIKSEGNLEVEDVGNKVWKKLYRRSFFQEGKSDKLGMITSCKMHDLFHDLAQSIMGEECVIIEKGRLTQLPTRVHHLHMLNYDASVNMAAFKKVESLRTFLDFGNIGLVPSTHCLRALCTTSYWLFPVTDLSHLRYLSWNRGSGEGLRNIICQLPKLQILKLQQLNQLRLPKELTQLQDLRHIVINNCESISEMPPNIGKLRHLRTLSTFVVGSKAGCGLSELHSLKLGGTLRIQGLENVPNECDAKQANLIGKKDLNILHLSWGGSANSEGSNVNIERILEALEPPSSLKSFGMKGYKGRQLSSWIRNGAVLRDLVEVILLDCNNCEELPPLGKLPQLKRLEVGGMKNVKWIDGESYDGVEEKAFPSLEELRVENLPSLERMLKEEGVEMLPCLSELTIVGMSNLKFPRLPSVGKVSICKAASFMEGVVKNMPCLKTLDIEMIEGQVVLPDQPSGLGSLQELIIFSCDDVEYFPEHVLEGLTSLRRLSILFCDNFKSLSEGVRHLTCLEILIIRFCLEMVTLPTNMSQLTALRTVTIDRCYTLPNGLQRVPSLRTLEISGCMSTSLPDWLGDMTSLQNLYISYCGELRSLPSSIQRLTNLSSLTLYECPYLKKRCKRETGEDWQYIKHIPEIELFSETTFCGFC* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1352 1093 CDD RX-CC_like 2 124 IPR038005 -
Pvu2g1352 1093 Pfam NB-ARC domain 163 414 IPR002182 GO:0043531
Pvu2g1352 1093 Gene3D - 418 501 IPR036388 -
Pvu2g1352 1093 Gene3D Ribonuclease Inhibitor 662 868 IPR032675 -
Pvu2g1352 1093 Gene3D Ribonuclease Inhibitor 869 987 IPR032675 -
Pvu2g1352 1093 Gene3D - 320 416 IPR042197 -
Pvu2g1352 1093 Gene3D Ribonuclease Inhibitor 516 659 IPR032675 -
Pvu2g1352 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 426 IPR027417 -
Pvu2g1352 1093 Gene3D - 6 119 - -
Pvu2g1352 1093 PANTHER DISEASE RESISTANCE PROTEIN RP 5 869 IPR044974 GO:0006952
Pvu2g1352 1093 Pfam Rx N-terminal domain 6 90 IPR041118 -
Pvu2g1352 1093 SUPERFAMILY RNI-like 864 1060 - -
Pvu2g1352 1093 Gene3D - 148 315 IPR027417 -
Pvu2g1352 1093 PRINTS Disease resistance protein signature 185 200 - -
Pvu2g1352 1093 PRINTS Disease resistance protein signature 258 272 - -
Pvu2g1352 1093 PRINTS Disease resistance protein signature 356 370 - -
Pvu2g1352 1093 PRINTS Disease resistance protein signature 997 1013 - -
Pvu2g1352 1093 SUPERFAMILY L domain-like 490 855 - -
Pvu2g1352 1093 Gene3D Ribonuclease Inhibitor 988 1083 IPR032675 -
Pvu2g1352 1093 PANTHER OS10G0130600 PROTEIN 5 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1352 Pvu-Chr2 26231274 26237129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1352 182 803 WRKY Transcription Factor Family AT5G45050 22.091 2.45e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1352 - - pvu:PHAVU_002G130700g 1645.56