Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1351 ATGGCCGAGGTTTTACTGGGAGTCGTCATTGAAAATTTGGGATCTTTTGTTCAAAAGAAACTCGCAACTTATTGGGGTGTTGACCAGCAGACTCAGAAGCTTTCCAGCAATCTCACTGCAATCCGTGCTGTCCTCAGAGACGCTGAGAGAGAGCAACTAAGAAAGCATGCTGTGAAGAATTGGCTGCAAAAACTCACAGATGCAGCATATGTGCTGGATGATATCTTGGATGCATGTTCAATTCACTCCACAAAGATGCACTCTCATGATCGACATACTTCATGCCTATCCCCTCTCCATCCTAAGGACATTTTCTTTCGTTTTCATATTGGAAAGCGGATGAAAGACATCACTCAAAGATTTCATGACATTCATCAAGAAAAGAGCAGCTTTAATTTAGAATCTGGGGTCACCGAGGTGGAAACAGTGGATGATGATTGGCGCCAAACTAGCTCTGACATTACAGAACCTACACTCTATGGCAGAGACCAGGATCGGGAGCAAATTGTAAAGTTTCTTCTGGAAGATGCCAGTAACAGTGAAGACCTCTCCGTCTATCCCATAGTTGGTATGGGTGGACTCGGCAAAACAACACTTGCCAAGCAGGTCTTCAATGATCACAGGGTATGCAACCATTTTGACTTGACAATTTGGGTTTGTGTTTCTGATGATTTCAACATCAAGACAATACTACAATCCATCATAGAATGTTGCACTGGACAAAACCCCAATCTCAATACCTTAGAAGCAGTGCGGAAAAGGGTTGAAGAAGTGTTGCAGAACAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAGCAGTTGAAGGGGAAGTTGTTGTGTGCAAGGGCAGCAAAAGGAGCTACCATTTTGGTCACCACTCGACTCCAGGAAGTTGCTTCTATCATGGAGACGCATCCTGCTTACCATTTGACAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGCTCAAAACAGAGAAGAAATAGAAGAGCTTGTGGCAATTGGCAGAGTGATAGTGAGAAGATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGTCTTTTGCGTGATAAAAGTGAGGTAAGCCAGTGGGAAAATGTAAAAGAAAGTGAGATTTGGAATATACGAGAGGAAAGTAGTTCTATGACAAGCGAGGAAAATTCTATCATGCGTGCTTTGAAACTGAGCTATTCTAATTTGGAGTTGTCTCTTAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGGCAAGGATGATCTAATTCATCTCTGGATGGCTAATGGGTTTATTAAATCTGAAGGAAGTGTAGAAGTGGAGGATGTTGGAAATAAAGTGTGGAAAAAATTATACCGTAGATCATTTTTTCAAGAAGCAAAGTCTGATGAGATTGGTATGATTAGAAGTTGCAAGATGCATGATCTATTTCATGATCTTGCCCAGTCTATTATGGGTGAAGAATGTGTGGTTATTGAGAAAGGAAGGTTCACTCAGTTGCCAACTAGAGTTCACTATCTAAACTTGTTAAATTATAAGGTGTCTGTTGATATTACTGCTTTCAGGAAAGTTGAATCCTTGCGGACTTTTATGGATTTTGGTGATATTGGCCTGGTGCCATCAAACAATTGTCTTCGAGTGTTACGTACACGTCATTTTTCGTTACTCAAGGATATAGGACATTTGAGATACTTGAGTTTGGAATGGAGTTTGGGATCAAGCTTATATAACATAAGTTTTCAGTTGCCGAAATTGCAAATATTGAAACTGGAAGGCTTCCGTGACCTTAGGCTGCCCAAAGAATTGACGCAATTACAGGATCTAAGACATATTATGATTGATGAGTGTGATGTAAAAGAGATGCCTCCGAATATTGGCAAGTTAAGGAATCTAAGAACACTGAACACTTTCGTTGTGGGATCAAAGGCAGGGTGTGGGTTAGCAGAGTTGCATAGCTTAAAGCTGGGAGGCAAGCTGAGCATTGAAGGCCTTGAGAACGTTCCCAATGAATCGGACGCTAAAGAAGCAAATTTGATTGATAAGAAGGACTTGAATGACCTAAAGTTGTCATGGGGTGGTAGTGCTAATTCAGAAGGTAGTAATGTGAACGTTGAGAGAGTACTGGAAGCCCTGCAACCTCCCTCAACTCTGAAGAGTTTTTGGATGGAAGGATATAAGAGGAGACAGTTATCGAGTTGGATGAGAAATTGTACAGTTCTGAGAGACTTGGTGTTAGTTAAACTCTTGGATTGTGACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACAATTGAAAATACTAGACGTGCGGGGAATGAAAAATGTGAAGTGGATAGGTGGTGAGTCGTATGATGGTGTGGAGGAGAAGGCATTTCCATTGTTGGAGAAATTGAGTGTGGAGAAATTACCAAAATTGGAGAGGATGTCGAGGGAAGAAGGAGTAGAGATGCTCCCTCGTCTTTCTGAATTAACAATTGATTGCGTCTCCAACCTTAAATTTCCACGTCTTCCTTCTGTTGAGAAGGTATGTATTTGCGAAGCGACTTCTTTCATGGAAGGGGTTGTGGAGAATATGCCTTGTTTAAAGACCTTGTTTGTTGCAAACATTAAAGAACTGGTGGTATTACCCGACCAACTACAGCATCTAACCATTGAAAATTGTAATGATTTGGAGTATTTTTCAGAACACGTGTTGGAAGGTCTGACCTCACTTCGAAATTTGAGTATTAAGAACTGTAAGAAATTAAAATCCCTATCTGAAGGTGTGCGACATTTGACATGTCTGAAGACTTTGAGTATCATGGATTGTCCAGAGGTGGTGACTCTACCAAGCAATATGACCCAACTAACTGCCCTTCAGTTTGTTAGAATCGAGGGTTGCTCCACATCACCCTATGGCTTACAATGTGTCCCCTCCCTACGAATTTTGGTTATATTATATTGTATGTGTACTTCATTGCCGGAGTGGGTGGGAGACATGACTTCTCTTCAAAATTTAAGGATTTGGTACTGTAGGGAGTTGAGGTCAGTACCGAGTAGCATTCAACGCCTCACCAACTTGTCTTCTTTAGAAATATACGGATGTCCTTATCTGGATAAGCGGTGCAAGAGGGAAACGGGAGAGGATTGGCAGTACATAAAGCATATTCCAGAAATAAAACTCGTCACACTCTGA 3234 0.4137 MAEVLLGVVIENLGSFVQKKLATYWGVDQQTQKLSSNLTAIRAVLRDAEREQLRKHAVKNWLQKLTDAAYVLDDILDACSIHSTKMHSHDRHTSCLSPLHPKDIFFRFHIGKRMKDITQRFHDIHQEKSSFNLESGVTEVETVDDDWRQTSSDITEPTLYGRDQDREQIVKFLLEDASNSEDLSVYPIVGMGGLGKTTLAKQVFNDHRVCNHFDLTIWVCVSDDFNIKTILQSIIECCTGQNPNLNTLEAVRKRVEEVLQNKRYLLVLDDVWNEDQEKWKQLKGKLLCARAAKGATILVTTRLQEVASIMETHPAYHLTELSGDDSWSLFKHHAFAQNREEIEELVAIGRVIVRRCVGSPLAIKTLGSLLRDKSEVSQWENVKESEIWNIREESSSMTSEENSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIGKDDLIHLWMANGFIKSEGSVEVEDVGNKVWKKLYRRSFFQEAKSDEIGMIRSCKMHDLFHDLAQSIMGEECVVIEKGRFTQLPTRVHYLNLLNYKVSVDITAFRKVESLRTFMDFGDIGLVPSNNCLRVLRTRHFSLLKDIGHLRYLSLEWSLGSSLYNISFQLPKLQILKLEGFRDLRLPKELTQLQDLRHIMIDECDVKEMPPNIGKLRNLRTLNTFVVGSKAGCGLAELHSLKLGGKLSIEGLENVPNESDAKEANLIDKKDLNDLKLSWGGSANSEGSNVNVERVLEALQPPSTLKSFWMEGYKRRQLSSWMRNCTVLRDLVLVKLLDCDNCEELPPLGKLPQLKILDVRGMKNVKWIGGESYDGVEEKAFPLLEKLSVEKLPKLERMSREEGVEMLPRLSELTIDCVSNLKFPRLPSVEKVCICEATSFMEGVVENMPCLKTLFVANIKELVVLPDQLQHLTIENCNDLEYFSEHVLEGLTSLRNLSIKNCKKLKSLSEGVRHLTCLKTLSIMDCPEVVTLPSNMTQLTALQFVRIEGCSTSPYGLQCVPSLRILVILYCMCTSLPEWVGDMTSLQNLRIWYCRELRSVPSSIQRLTNLSSLEIYGCPYLDKRCKRETGEDWQYIKHIPEIKLVTL* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1351 1077 SUPERFAMILY RNI-like 838 1052 - -
Pvu2g1351 1077 Pfam NB-ARC domain 163 414 IPR002182 GO:0043531
Pvu2g1351 1077 CDD RX-CC_like 2 124 IPR038005 -
Pvu2g1351 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 426 IPR027417 -
Pvu2g1351 1077 SUPERFAMILY L domain-like 475 892 - -
Pvu2g1351 1077 Gene3D Ribonuclease Inhibitor 506 857 IPR032675 -
Pvu2g1351 1077 Gene3D - 418 501 IPR036388 -
Pvu2g1351 1077 Pfam Rx N-terminal domain 6 92 IPR041118 -
Pvu2g1351 1077 Gene3D - 320 416 IPR042197 -
Pvu2g1351 1077 Gene3D - 148 315 IPR027417 -
Pvu2g1351 1077 Coils Coil 31 51 - -
Pvu2g1351 1077 Gene3D Ribonuclease Inhibitor 981 1056 IPR032675 -
Pvu2g1351 1077 PANTHER DISEASE RESISTANCE PROTEIN RP 29 941 IPR044974 GO:0006952
Pvu2g1351 1077 PANTHER OS05G0414200 PROTEIN 29 941 - -
Pvu2g1351 1077 Gene3D Ribonuclease Inhibitor 858 979 IPR032675 -
Pvu2g1351 1077 PRINTS Disease resistance protein signature 185 200 - -
Pvu2g1351 1077 PRINTS Disease resistance protein signature 258 272 - -
Pvu2g1351 1077 PRINTS Disease resistance protein signature 356 370 - -
Pvu2g1351 1077 PRINTS Disease resistance protein signature 919 935 - -
Pvu2g1351 1077 Gene3D - 6 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1351 Pvu-Chr2 26201381 26205023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1351 182 800 WRKY Transcription Factor Family AT5G45050 22.305 3.59e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1351 - - pvu:PHAVU_002G130700g 1580.84