Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1350 ATGGCTGAGGCTTTGCTGGGAATTGTAATTCACAACTTGCAATCTTTTGTCCAAGACCAACTTGCAACGTTTTGGGGTGTTGACCAACAGACTCAGAAGCTTTCCAGCAATCTCACCGCAATCCGTGCTGTCCTCAGAGATGCTGAGAAAAAGCAAATAACAAGCGAGGTCCTCAAGAATTGGCTGCAGAAACTCACTGATGCAGCATATGTGCTGGATGATATCTTGGATGAATGTTCAATTCACTCCACAAAGATGCACTCTGATGATGGACATAGTTCATGCCTATCCCCTCTCCATCCTAAGGAAATTCTCTTTCGTTTCAATATTGGCAAGAGGATGAAAGACATCACCCAAAGATTTCATGACATTCATGAACAAAAGAGCAGGTTTAATTTAGAACTTGGGGTCACCGAGGTGCAAACAGTGGATGATGATTGGCGCCAAACTAGCTCTGACATTACAGAACCTACACTCTATGGCAGAGACAAGGATCGAGATCAAATTGTGAAGTTTCTTCTGAAAGATGCAAGTAACAGTGAAGACCTCTCCGTATATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACACTTGCCAAACAGGTCTTCAATGATCACGAGGTATGCAAACATTTTGACTTGACTATTTGGGTTTGTGTTTCTGATGATTTCAACACGAAGACGATACTACAATCCATCATAGAATGTTGCACTGGACAAAATCCCAATCTCAATACCTTAGAAGCAGTGCGGAAAAGGGTTGAAGAAGTGTTGCAGAGCAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACAAAGAGAAATGGAAGCAGTTGAAGGGGAAGTTGCAGTGTGCAAGGGCAGAAAAAGGAGCTACCATTTTGGTCACCACTCGACTCCAGGAAGTTGCTTCCACCATGGAGACGCACCCTGCTTACCATTTGACAAAATTATCAGAAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGGAGCAAACAGAGAAGAAATAGAAGAGCTCGTGGCAATTGGCAGAGAGATGGTGAGAAAATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGTCTTTTGCGTGATAAAAGTGAGGTAAGCCAATGGGAAAATGTAAAAGAAAGTGAGATTTGGAATATACGAGAGGAAAGTAGTTCTATGACAAGTGAGGAAAATTCTATCATGCGTGCTTTGAAACTGAGCTATTCTAACTTGGAGTTGTCTCTGAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGACAAGGAAGAACTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAACGTAGAAGTGGAGGATGTTGGAAATAAAGTGTGGAACAAATTATACCGTAGATCATTTTTTCAAGAAGCAAAGTCTGATAAGCTAGGTATGATTAGAAGTTGCAAGATTCATGATCTATTTCATGATCTTGCCAAGTCTATTATGGGTGAAAAATGTGTGGTTATTGAGAAAGGAAGGTTGACTCAGTTGCCAACTAGAGTTCACTATGTAAGCTTGTCAAATTCTAAGGTGTCAGTTGATATGACCGCTTTCAAGAAAGTTGAATCCTTGAGGACTTTTATGGATTTGGGTGATATTGGCCTGGTGCCATCAAACCATTGTCTCCGAGCATTGTGCACAACTTCTTATTGGTTGTCCCCAGTCAATGATTTAGCACATTTGAGATACATGAGTTGGAATAGGGGTTCGGGAGCAGGCTTACATAACTTAATTTGTAAGTTGCCGAAATTGCAAATATTGAAACTACAAAATATGAAGCAACTTAGGCTGCCCAAAGAATTGACGCAATTACAGGATCTAAGACATATTGTGATTAATAATTGTGAGTCAATATCAAAGATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTGAACACTTACGTTGTGGGTTCAAAGGCAGGGTGTGGGTTAGCAGAGTTGCATAGCTTAAAGTTGGGTGGCACGCTGAGAATCGAAGGCCTTGAGAATGTCCCAAATGAATGGGATGCTAGACAAGCAAATTTGATTGGTAAGAAGGACTTGAATATCCTACACTTGTCATGGGGTGGTAGTGCTAATTCAAAAGGTAGTAATGTTGACATTGAGAGAATACTGGAAGCCCTGGAACCTCCCTCAAGTCTAAAGAGTTTTGGGATGAAAGGATATCAGGGGAGACGGTTATCGAGTTGGATAAGAAATGGTGCAGTTCTGAGAAACTTGGTGGAAGTTAAACTCTTGGACTGTGAAAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACACTTGAAAAGGCTAGAAGTGAGTGGAATGAAAAATGTGGAGTGGATAGATGGTGAGTCGTATGATGGTGTGGAGGAGAAGGCATTTCCATCGTTGGAGAAATTGAAGGTGGAGAATTTACCAAAATTAGAGAGGATGTTGAGGGAAGAAGGAGTAGAGATGCTCCCTCGTCTTTCCCAATTACATATTGGTGGCATCTCCAACCTTACATTTCCATGTCTTCCTTCTGTTGAGGAACTTCGTGTTGAGAAGATTGACGAAGCGGCTTCCTTGATGGAAGGGGTTGTGGAGAATATGCCTTGTCTAAAGACCTTGTTTATTGGAAACATTAAAGGACTAGTGGTATTACCTGACCAACTCAGCGGGTTGGGTTCACTACAGGAACTACACATTCAATGTTGTTATGATTTGGAGTATTTCCCAGAACATGTGTTGGAAGGTCTGACCTCTCTTCGAATTTTACACATTTTATTATGTTATAACTTTAAATCCTTATCTGAAGGTGTCCGATATCTAACATGTCTGGAGAGTTTGAAGATCAGGTATTGTCCAGAGCTGGTGACTCTACCAAACAATATGACCCAACTAACTGCTCTTCGGATTATCTCAATCATGGGTTGCTCCACATTACCGTATGGCTTACAATGTGTCCCCTCCTTAAGAACTTTGAATATAACAAATTGCACGTCTACTTCACTGCCGGACTGGCTGGGAGAGATGACTTCTCTTCAAAACTTACACATTTGGGACTGTGAGAAGCTGAGGTCAGTACCGAGTAGCATTCAACGCCTCACCAACTTGTCTCTTTTATATATAAGCGAATGTCCATATCTGAAGAAGCGGTGCAAGAGGGAAACGGGAGACGATTGGCAATACATAAACCACATTCCAGAAATACAACTTTTTTCCAAAACGAAACCGACTTTTTTGTGGTAA 3291 0.4132 MAEALLGIVIHNLQSFVQDQLATFWGVDQQTQKLSSNLTAIRAVLRDAEKKQITSEVLKNWLQKLTDAAYVLDDILDECSIHSTKMHSDDGHSSCLSPLHPKEILFRFNIGKRMKDITQRFHDIHEQKSRFNLELGVTEVQTVDDDWRQTSSDITEPTLYGRDKDRDQIVKFLLKDASNSEDLSVYPIVGMGGLGKTTLAKQVFNDHEVCKHFDLTIWVCVSDDFNTKTILQSIIECCTGQNPNLNTLEAVRKRVEEVLQSKRYLLVLDDVWNEDKEKWKQLKGKLQCARAEKGATILVTTRLQEVASTMETHPAYHLTKLSEDDSWSLFKHHAFGANREEIEELVAIGREMVRKCVGSPLAIKTLGSLLRDKSEVSQWENVKESEIWNIREESSSMTSEENSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIDKEELIHLWMANGFIKSEGNVEVEDVGNKVWNKLYRRSFFQEAKSDKLGMIRSCKIHDLFHDLAKSIMGEKCVVIEKGRLTQLPTRVHYVSLSNSKVSVDMTAFKKVESLRTFMDLGDIGLVPSNHCLRALCTTSYWLSPVNDLAHLRYMSWNRGSGAGLHNLICKLPKLQILKLQNMKQLRLPKELTQLQDLRHIVINNCESISKMPPNIGKLRHLRTLNTYVVGSKAGCGLAELHSLKLGGTLRIEGLENVPNEWDARQANLIGKKDLNILHLSWGGSANSKGSNVDIERILEALEPPSSLKSFGMKGYQGRRLSSWIRNGAVLRNLVEVKLLDCENCEELPPLGKLPHLKRLEVSGMKNVEWIDGESYDGVEEKAFPSLEKLKVENLPKLERMLREEGVEMLPRLSQLHIGGISNLTFPCLPSVEELRVEKIDEAASLMEGVVENMPCLKTLFIGNIKGLVVLPDQLSGLGSLQELHIQCCYDLEYFPEHVLEGLTSLRILHILLCYNFKSLSEGVRYLTCLESLKIRYCPELVTLPNNMTQLTALRIISIMGCSTLPYGLQCVPSLRTLNITNCTSTSLPDWLGEMTSLQNLHIWDCEKLRSVPSSIQRLTNLSLLYISECPYLKKRCKRETGDDWQYINHIPEIQLFSKTKPTFLW* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1350 1096 CDD RX-CC_like 2 124 IPR038005 -
Pvu2g1350 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 426 IPR027417 -
Pvu2g1350 1096 Gene3D - 6 119 - -
Pvu2g1350 1096 Gene3D - 418 501 IPR036388 -
Pvu2g1350 1096 SUPERFAMILY RNI-like 859 1066 - -
Pvu2g1350 1096 Gene3D - 320 416 IPR042197 -
Pvu2g1350 1096 Pfam Rx N-terminal domain 6 91 IPR041118 -
Pvu2g1350 1096 PRINTS Disease resistance protein signature 185 200 - -
Pvu2g1350 1096 PRINTS Disease resistance protein signature 258 272 - -
Pvu2g1350 1096 PRINTS Disease resistance protein signature 356 370 - -
Pvu2g1350 1096 PRINTS Disease resistance protein signature 762 778 - -
Pvu2g1350 1096 Gene3D - 147 315 IPR027417 -
Pvu2g1350 1096 Gene3D Ribonuclease Inhibitor 511 870 IPR032675 -
Pvu2g1350 1096 SUPERFAMILY L domain-like 476 941 - -
Pvu2g1350 1096 Pfam NB-ARC domain 163 414 IPR002182 GO:0043531
Pvu2g1350 1096 Gene3D Ribonuclease Inhibitor 871 994 IPR032675 -
Pvu2g1350 1096 Gene3D Ribonuclease Inhibitor 995 1068 IPR032675 -
Pvu2g1350 1096 PANTHER DISEASE RESISTANCE PROTEIN RP 5 869 IPR044974 GO:0006952
Pvu2g1350 1096 PANTHER OS10G0130600 PROTEIN 5 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1350 Pvu-Chr2 26192610 26196065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1350 182 803 WRKY Transcription Factor Family AT5G45050 24.006 1.76e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1350 - - pvu:PHAVU_002G130700g 1653.26