Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1347 ATGGCCGAGGCTTTACTGAAAATCGTGATTGAAAATTTGGGATCTTTAGTTCAAAACCAACTTGTAACTTATTGGGGTGTAGACCAGCAGACTCAAAAGCTTTCCAGCAATCTCACTGCAATTCATGCTGTTCTTAGAGACGCTGAGAGTAAGCAAATAATAAGTCATGCTGTGAAGAGTTGGCTGCAGAAACTCACAGATGCAACATATGTGCTGGATGATATCTTGGATGAATGTTCATTTCAATCCAAAAAGGTGCTATCTGATGACGAGCGAAATTCATGCTTGGCCCATGTGCATCCCAAGGACATTCTCTTTCGTTTTCATATTGGAAAGAGGATGAAAGACATCACCCAAAGATTTCATGATATTAATGAAGAAAGAAGCATGTTTGAGTTACGTGATGATGTAACAGAGAAGCAAGCAGTGAATGATGATGATAATTGGCGCCAAACTAGCTCTGACATTACAGAACCTATAGCCTATGGCCGAGACCGGGATCGAGAGGAAATTGTGAAGTTTCTCCTGGAAGATGTCAGTAACAGTGAAGAACTTTCCGTATATCCCATAGTTGGTATGGGTGGACTTGGAAAAACAACACTTGCCAAGCAGGTCTTCAATGATCACAAGGTATGCAACCATTTTGACTTGACAATTTGGGTTTGTGTTTCTGATGATTTCAATGCGAAGACGATTCTAGAATCCATAATAGAGTGTTGCACTGGAAAAAATCCCAATCTCAAAACCATAGAAGCAGTGCGGAAAAAGGTTGAAGAAGTGTTGGACAGCAAAAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAGCAGTTGAAGGGAAAGTTGTTGTGTGCAAGGGCAGCAAAAGGAGCTACCATTTTGGTTACCACTCGACTCGAGGAAGTTGCTTCCACCATGGAGACGCATCCTGCTTACCATTTGAAAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGCTCAAAACAGAGAAGAAATAGAAGAGCTTGTGGCAATTGGCAGAGAGATAGTGAGAAAATGCATTGGTTCACCACTTGCAATCAAAACAATGGGAAGTCTTTTGCGTGATAAAAGTGAGGTAAGCCAATGGGAAAATGTAAAAGAAAGTGAGATTTGGAATATACGAGAGGAAAGTAGTTCTATGACATGTGAGGAAAATTCTATCATGCGTGCTTTGAGACTGAGCTACTCTAATTTGGAGTTGTCTCTGAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAGATAGACAAGGAAGATCTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAATGTAGAAGTGGAGGATGTTGGAAATAAATTGTGGAAAAAATTATACCGTAGATCATTTTTTCAAGAAGCAAAGTTTGATAGGCTTGGAAGGTTGACTCCGTTGTCAACTAGAGTTCACTATTCAAGCTTGTTAAATTCTAAGGTTGATATGACTGCTTTCAAGAAAGTTCAATCCCTGCGGACATTTCTGGATTTGGGTCATATTGGCCTGTTGCCATCAAACCATTGTCTCCGAGTATTGCGCACATGTTCTTCTTTTTTGTTCCCACTCAAGGATTTAAGACATTTGAGATACTTGAGTTGGAATTGGGGTTCTGGAAAAGGCTTACATAAATTAATTTGTCAGTTGCCGAAATTGCAAATATTGAAACTACAAAATATTAGGCAATTTAGGCTGCCGAAAGAATTGACGCAATTACAGGATCTAAGGCATATTGTGATTGATAATTGTTATTCAATACAAGAGACGCCTCCGCATATTGGCAAGTTAAGGCATCTAAGAACACTGAGCACTTTCTTTGTGGGATCAAAGGCAGGGTGTGGGTTAGCAGAGTTGCATAGCTTAAAGCTTGGAGGCACGCTGAGAATCAAAGGCCTTGAGAACGTCCCCAATGAATGGGATGCGAAACAGGCAAATTTAACTGGTAAGAAGGACTTGAATATCCTAGAATTGTCATGGGGTGGTAATGCTAATTCAGAAGGTAATAATATTAACGTTGAGAGAGTACTGGAAGCCTTGCAACCTCCCTCAACTCTGAAGAGTTTTGAGATGAAAGGATATCAGGGGAGACAATTATCGAGTTGGATGAGAAATGGTGCAGTTCTGAGAGACTTGGTGGAAGTTAGACTGTTGGACTGTGACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTAAGACAGTTGAAAAGGCTACATGTGAGTGGAATGAAATATGTGAAGTGGATAGATGGTGAGTCGTATGATGGTGTGGAGGAGAAGGCATTTCCTTTGTTGGAGAATTTGTTGGTGAGGAATTTACCAAAATTGGAGAGGATATTGAGGGAAGAAGGGGTAGAGATGCTCCCTAGTCTTTCTCATTTAACAATTATTGGCATCTCCTCCAACATTAAATTTCCACGTCTTCCTTCTGTTCAGCACCTTAGTATTTGCGATGCGACTTCCTTCATGGAAGGGATTGTGGAGAATATGCCTTGTCTAAAGGCCTTGGACATTGAATGGATTAATGGAATGGTGGTATTAACCGACCAACTCAGCGGGTTGGGTTCACTACAGAGACTAATCATTGAATCTTGTGATGAGTTGGAGTATTTTTCAGAACATGCGTTGGAAGGTCTAACCTCTCTTCGATATTTGAGTATTTACAAATGTTATAACTTAAAATCCTTATCTGAAGGTGTGCAATATTTGATATGTCTAGAGAGTTTGAGTATCGAATGTTGTTTTGAGCTGGTGACTCTACCAAGCAATATGACCCAACTAACTGCCCTTTGGACTGTCTCAATCAATAATTGCTCCACATTACCCTATGGCTTACAATGTGTCCCCTGCCTACGAACTTTGAATATAGATGTTTGCATGTTTAGTTCATTGCCTGATTGGCTAGGAGACATCACTTCTCTTCAAGAATTAAAGATTCATTATTGTGTAAAGTTGAGATCACTACCAAGTAGCATTCAACGCCTCACCAACTTGTCTTCTTTAAGTATACGCGGATGTCCTTATCTGACGAAGCGGTGCAAGAGGGATACGGGAGAGGATTGGCAATACATAAACCACATTCCAAAAATATTACTCGACCCATTCCCACTCCGAGAGGAAAAGACTTCAAGATTTTGTGAGAGCATCCGGCGAGGATCATCTCGCTCATGGAACTGCCTTCTACGTAAGTGCCTGTAA 3267 0.4053 MAEALLKIVIENLGSLVQNQLVTYWGVDQQTQKLSSNLTAIHAVLRDAESKQIISHAVKSWLQKLTDATYVLDDILDECSFQSKKVLSDDERNSCLAHVHPKDILFRFHIGKRMKDITQRFHDINEERSMFELRDDVTEKQAVNDDDNWRQTSSDITEPIAYGRDRDREEIVKFLLEDVSNSEELSVYPIVGMGGLGKTTLAKQVFNDHKVCNHFDLTIWVCVSDDFNAKTILESIIECCTGKNPNLKTIEAVRKKVEEVLDSKRYLLVLDDVWNEDQEKWKQLKGKLLCARAAKGATILVTTRLEEVASTMETHPAYHLKELSGDDSWSLFKHHAFAQNREEIEELVAIGREIVRKCIGSPLAIKTMGSLLRDKSEVSQWENVKESEIWNIREESSSMTCEENSIMRALRLSYSNLELSLRRCFSFCAIFPKDFEIDKEDLIHLWMANGFIKSEGNVEVEDVGNKLWKKLYRRSFFQEAKFDRLGRLTPLSTRVHYSSLLNSKVDMTAFKKVQSLRTFLDLGHIGLLPSNHCLRVLRTCSSFLFPLKDLRHLRYLSWNWGSGKGLHKLICQLPKLQILKLQNIRQFRLPKELTQLQDLRHIVIDNCYSIQETPPHIGKLRHLRTLSTFFVGSKAGCGLAELHSLKLGGTLRIKGLENVPNEWDAKQANLTGKKDLNILELSWGGNANSEGNNINVERVLEALQPPSTLKSFEMKGYQGRQLSSWMRNGAVLRDLVEVRLLDCDNCEELPPLGKLRQLKRLHVSGMKYVKWIDGESYDGVEEKAFPLLENLLVRNLPKLERILREEGVEMLPSLSHLTIIGISSNIKFPRLPSVQHLSICDATSFMEGIVENMPCLKALDIEWINGMVVLTDQLSGLGSLQRLIIESCDELEYFSEHALEGLTSLRYLSIYKCYNLKSLSEGVQYLICLESLSIECCFELVTLPSNMTQLTALWTVSINNCSTLPYGLQCVPCLRTLNIDVCMFSSLPDWLGDITSLQELKIHYCVKLRSLPSSIQRLTNLSSLSIRGCPYLTKRCKRDTGEDWQYINHIPKILLDPFPLREEKTSRFCESIRRGSSRSWNCLLRKCL* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1347 1088 SUPERFAMILY L domain-like 529 894 - -
Pvu2g1347 1088 PANTHER OS05G0414200 PROTEIN 29 918 - -
Pvu2g1347 1088 Gene3D - 150 317 IPR027417 -
Pvu2g1347 1088 Gene3D - 322 418 IPR042197 -
Pvu2g1347 1088 PANTHER DISEASE RESISTANCE PROTEIN RP 29 918 IPR044974 GO:0006952
Pvu2g1347 1088 CDD RX-CC_like 2 126 IPR038005 -
Pvu2g1347 1088 Pfam Rx N-terminal domain 6 85 IPR041118 -
Pvu2g1347 1088 Gene3D Ribonuclease Inhibitor 478 823 IPR032675 -
Pvu2g1347 1088 Gene3D Ribonuclease Inhibitor 824 960 IPR032675 -
Pvu2g1347 1088 Pfam NB-ARC domain 168 416 IPR002182 GO:0043531
Pvu2g1347 1088 Gene3D Ribonuclease Inhibitor 961 1040 IPR032675 -
Pvu2g1347 1088 Gene3D - 6 118 - -
Pvu2g1347 1088 SUPERFAMILY RNI-like 792 1039 - -
Pvu2g1347 1088 PRINTS Disease resistance protein signature 187 202 - -
Pvu2g1347 1088 PRINTS Disease resistance protein signature 260 274 - -
Pvu2g1347 1088 PRINTS Disease resistance protein signature 358 372 - -
Pvu2g1347 1088 PRINTS Disease resistance protein signature 733 749 - -
Pvu2g1347 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 428 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1347 Pvu-Chr2 26148601 26152035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1347 190 774 WRKY Transcription Factor Family AT5G45050 21.805 1.67e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1347 - - pvu:PHAVU_002G130700g 2189.46