Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1343 ATGGCTGGCGCTTTGCTGGGAACTGTGTTTCAAAACTTGCAATCTGTTGTTAAAGACCAACTTGCAACTTATTGGGGTGTTGATCAACACACTCAAAAGCTTTCCAGCCATCTCACCGCAATTCGTGCTGTCCTCAACGACGCTCAGAGAAAGCAAATAACAAGCCAGGCTGTGAAGGATTGGCTGCAGAAACTCACAGACGCAACATATGTGCTTGATGATATCTTGGATGATTGTTCACTTCAATCCAAAAAGGTGCACTCTGGTGACGAACGAAGTTCATGCTTGGCCCGTGTGCATCCCAGGGACATTCTCTTTCGTTTTCATATTGGAAAGAGGATGAAAGACATCACCCAAAGATTTCACGATATCAATGAAGAAAGAAGCATGTTTGAGTTACGTGATGGTGTAACAGAGAAGCAAGCAATGAATGATGATGTTGATTGGCGCCAAACTAGCTCTGACATTACAGAACCTATAGTCTATGGCAGAGACCAGGATCGAGAGCAAATTGTGAAGTTTCTTCTGGAAGATGCCAAGAACAGTGAAGACCTCTCCGTATATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACACTTGTCAAGCAGGTCTTCAATGATCACAGGGTATGCAACCATTTTGACTTGACAATTTGGGTTTGTGTTTCTGATGATTTCAACACCAAGACAATACTAGAATCCATCATAGAATGTTGCACGGGACAAAATCCCAATCTCAAGACCTTAGAAGCAGTGCGGAAAAAGGTTGAAGAAGTGTTGCAGAGCAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAGCAGTTGAAGGGGAAGTTGCACTGTGCTAGGGCAGCTAAAGGAGCTACTATTTTGGTCACCACTGGACTCGAGGAAGTTGCTTCCACCATGGAGACACACCCTGCGTATCTTTTGAAAAAATTATCGGATGACGACAAAGAAATAGAAGAGCTCGTGGCAATTGGCAGAGAGATAGTGAGAAAATGCGTTGGTTCGCCACTTGCAATCAAAACACTAGGAAGCCTTCTGCGTGATGAAAGTGAGGTAAGCCAATGGGAAAATGTAAAAGAAAGTGAGATTTGGAATATACGTGAGGAAAATTCTATCATGCGTGCTTTGAAACTGAGCTATTCTAATTTGGAGTTGTCTCTGAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGTCAAGGAAGAAGTAATTCATCTTTGGATGGCTAATGGATTTATTAAATCTGAAGGAAACGTAGAAGTGGAGGATGTTGGAAATAAAGTGTGGAAAAAATTAGACCGTAGATCATTTTTTCAAGAAGCACAGTCTGATGAGATTGGTATGATTGGAAGTTGCAAGATGTATGATCTATTTCATGATCTTGCCCAGTCTATTATGGGTGAAGAATGTATGATTATTGAGAAAGGAAGGTTGACTCAATTGTCAACTAGAGTTCACCATTTGCACGTGTTAAGTTCTAATATCTCTGTAGATATGGCTGCATTCAAGAAAGTTGAGTCCCTCCGGACTTTTCTTGATTTTGGTAATACTGGCCTGGTGCCATCAACCCGTTGTCTCCGAGCATTATGCATTAGTTATTTTGTGTTGTCTCCACGGAATGATTTAGCACATTTGAGATACTTGAGTGTGCGTTGGAGTTCGAAGGCATGCTTGCTTAATTCAATTTGTCAGTTGCCAAAATTGCAAATATTGAAACTAGAAAATATGAGCCAACTTAGGTTGCCCAAAGAATTAACCCAATTACAGGATCTAAGACATATTGTGATTAATAAGTGTGAGTCAATATCAGAGATGCCTCCGAATATTGGCAAGTTGAGGCATCTAAGAACACTGAGCACTTACATTGTGGGTTCAAAGGCAGGGTGTGAGTTAACAGAGTTGCATAGCTTAAAGTTGGGAGGCACGCTGAGAATCGAAGGCCTTGAGAACGTCCCGAATGAATGGGATGCTAAACAAGCAAATTTAATTGGTAAGAAGGACTTGAATATCCTACACTTGTCATGGGGTGGTAGTGCTAATTCAGAAGGTAGTAATGTTAACGTTGAGAGAGTACTGGGAGCCCTGCAACCTCCCTCAACTCTGAAGAGTTTCGTGATGAAAGGGTATAAGGGAAGACAGTTATCGAGTTGGATGAGAAATGGTGCAGTTCTGAGAGACTTGGTGGAAGTTAAACTCTTGGATTGTGACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACAGTTGAAAAGGCTAGACGTGCGTGGAATGAAAAATGTGAAGTGGATAGATGGTGAGTCGTATGAAGCTGTGGAAGAGAAGGCATTTCCATCGTTGGAGGAATTGAGGGTGGAGAATTTACCAACTTTGGAGAGGTTGTTGAGAGATGAAGGAATAGAGATGGTCCCTCGTCTCTCCCAATTAAGAATTGATGGTGTGATGAACCTTAAAGTCCCACATCTTCCTTCTGCTGAGAAGCTATATGCTAGGAGAATTGACGCAGCGACTTCCTTCATTGAAGGGGTTGGGGAGAATATGGGGTGTCTAAAGACCCTGGATATTAGGGTGATTAAAGGAGTCATGGTACTACCTTACCACTTAAAAGTTGAGTATTTACAAGTGTGA 2679 0.4181 MAGALLGTVFQNLQSVVKDQLATYWGVDQHTQKLSSHLTAIRAVLNDAQRKQITSQAVKDWLQKLTDATYVLDDILDDCSLQSKKVHSGDERSSCLARVHPRDILFRFHIGKRMKDITQRFHDINEERSMFELRDGVTEKQAMNDDVDWRQTSSDITEPIVYGRDQDREQIVKFLLEDAKNSEDLSVYPIVGMGGLGKTTLVKQVFNDHRVCNHFDLTIWVCVSDDFNTKTILESIIECCTGQNPNLKTLEAVRKKVEEVLQSKRYLLVLDDVWNEDQEKWKQLKGKLHCARAAKGATILVTTGLEEVASTMETHPAYLLKKLSDDDKEIEELVAIGREIVRKCVGSPLAIKTLGSLLRDESEVSQWENVKESEIWNIREENSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIVKEEVIHLWMANGFIKSEGNVEVEDVGNKVWKKLDRRSFFQEAQSDEIGMIGSCKMYDLFHDLAQSIMGEECMIIEKGRLTQLSTRVHHLHVLSSNISVDMAAFKKVESLRTFLDFGNTGLVPSTRCLRALCISYFVLSPRNDLAHLRYLSVRWSSKACLLNSICQLPKLQILKLENMSQLRLPKELTQLQDLRHIVINKCESISEMPPNIGKLRHLRTLSTYIVGSKAGCELTELHSLKLGGTLRIEGLENVPNEWDAKQANLIGKKDLNILHLSWGGSANSEGSNVNVERVLGALQPPSTLKSFVMKGYKGRQLSSWMRNGAVLRDLVEVKLLDCDNCEELPPLGKLPQLKRLDVRGMKNVKWIDGESYEAVEEKAFPSLEELRVENLPTLERLLRDEGIEMVPRLSQLRIDGVMNLKVPHLPSAEKLYARRIDAATSFIEGVGENMGCLKTLDIRVIKGVMVLPYHLKVEYLQV* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1343 892 CDD RX-CC_like 11 126 IPR038005 -
Pvu2g1343 892 PANTHER OS05G0414200 PROTEIN 29 841 - -
Pvu2g1343 892 SUPERFAMILY L domain-like 455 873 - -
Pvu2g1343 892 Pfam NB-ARC domain 165 394 IPR002182 GO:0043531
Pvu2g1343 892 Gene3D - 150 315 IPR027417 -
Pvu2g1343 892 PRINTS Disease resistance protein signature 187 202 - -
Pvu2g1343 892 PRINTS Disease resistance protein signature 260 274 - -
Pvu2g1343 892 PRINTS Disease resistance protein signature 344 358 - -
Pvu2g1343 892 PRINTS Disease resistance protein signature 742 758 - -
Pvu2g1343 892 PANTHER DISEASE RESISTANCE PROTEIN RP 29 841 IPR044974 GO:0006952
Pvu2g1343 892 Pfam Rx N-terminal domain 6 88 IPR041118 -
Pvu2g1343 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 406 IPR027417 -
Pvu2g1343 892 Gene3D - 6 118 - -
Pvu2g1343 892 Gene3D Ribonuclease Inhibitor 492 880 IPR032675 -
Pvu2g1343 892 Gene3D - 316 396 IPR042197 -
Pvu2g1343 892 Gene3D - 398 485 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1343 Pvu-Chr2 26045817 26048537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1343 180 783 WRKY Transcription Factor Family AT5G45050 23.661 1.15e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1343 - - pvu:PHAVU_002G130500g 1349.73