Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1339 ATGGCCGAGGCTTTACTGGAAATCGTGATTGAAAATTTGGGATCTTTTGTTCAAAACCAACTTGCAACTTATTGGGGTCTTGACCAGCAGGCTCAAAAGCTTTCCAGCAATCTCACTGCAATCCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAACTAACAAGCCATGCTGTGAAGGATTGGCTGCAGAAACTCACAGATGCAGCATATGTGCTTGATGATATCTTGGATGAATGTTCAATTCAATCCATAAAGGAGCACTCTGATGATGGGCAAAGTTCATGTTTGGCCCGTGTGCATCCTAAGGACATTCTCTTTCGTTTTCATATTGGAAAGAGGATGAAAGACATCACTCAAAGATTTCATGACATTCATCAAGAAAGGCTCACATTTGAATTACGTGTGGGTGTCACAGAGAAGCAAGCAGTGGATGATGATGATGATGATTGGCGCCAAACTAGCTCTGTAATTACGGAACCTATATTTTGTGGCAGAGACCAGGATCGAGAGAAGATTGTGAAGTTTCTCCTGGAAGATGCCAGTAACAGTGAAGACCTCTCCATCTATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACACTTGCCAAGCACGTCTTCAATGATCACAGGGTACGCAACCATTTTGACTTGAAAGTTTGGATTTGTGTTTCTGATGATTTCAACACCAAGACCATATTACAATCCATCATAGAATGTTGCACTAGACAAAATCCCAATCTCAATACCTTAGAAGCATTGCGGAAAAAGGTTGAAGAAGTGTTGCAGAGCAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAGGGGAAGGACTTAAAAGGGATGTTGCAGTGTGCAAGGGGAGCAAAAGGAGCTGCAATTTTGGTCACCACTCGACTGCAGGAAGTTGCCTCCGTGATGGGGACGCATCCTGCTTACCATTTGAAAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGGACCAAACAGAGAGGAAATAGAAGAGCTCGTGACAATTGGCAGAGAGATAGTGAGAAAATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGCCTTTTGCATGATGAAGGTGAGGTAAGCCAATGGGAAAATGTAAAGGAAAGTGAGATTTGGAATATACGCGAGGAAAGTAGTTGTATGACATGTGAGGAAAATTCTATCATGCGTGCTTTGAAATTGAGTTATTCTAATTTGGAGTTGTCTATGAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGTCAAGGAAGAACTAATTCATCTATGGATGGCTAATGGACTTATTAAATGTGAAAGAAATGTAGAAGTGGAGGATGTCGGAAATAAAGTGTGGAAAAAATTATATCGTAGATCATTTTTTCAAGAAGCAAAGTCTGATGATATTGGTATGATTAGAAGTTGCAAGATGCATGATCTATTTCATGATCTTGCTCAGTCTATTATGGGTGAAGAATGTGTGGTTATTGAGAAAGGAAGGTTGACTCAGTTGTCAACTAGAGTTCACCATTTGCACGTGTTAAATTCTGACGTCTCTGTCGACATGGCTGCTTTCAAGAAAGTTGAGTCCCTGCGGACTTTTCTCGATATTGGTAATATTGGTCATTTGCCATCAAACCCTTGTCTCCGAGCATTACGCATAACTTCTTTTGTGTTGTCTCCATTGAATGATTTAGCACATTTGAGATACTTGAGTTTGGATGGGAATTCGAGAGCAAGCTTAAATAACATAATTTGTCAGTTGCCGAAATTGCAAATATTGAAACTACAAAATATGAGCCAACTTAGGCTGCCCAAAGACTTGACGCAATTACAGGATCTAAGACATATTGTGATTAATAGGAATGTGTCAATATTAGAGATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTGAGCACTTTCGTTGTGGGATCAGAGACAGGGTGTGGGTTAGCAGAGTTGCATAGCTTAAAGCTGGGAGGCACGCTGAAAATTGAAGGCCTTGAGAACGTCCCCAATGAATGGGATGCCAAACAAGCAAATTTGATTGGTAAGAAGGACTTGAATATCCTACACTTATCATGGGGTGGTAGTGCGAATTCAGAAGATAGTAATGTCAACGTTGAGAGAGTACTGGAAGCCCTGCAACCTCCCTCAACTCTGAAGAGTTTTGTGATGAAAAGATTTAAGGGGAGACAGTTATCGAGTTGGATGAGAAATAGTTCAGTTCTGAGAGACTTGGTGGAAGTTAAACTTTTGAACTGTGAAAACTGTGAGGAGCTTCCCCCACTTGGTAAACTACCACACTTGAAAAGGCTAGAAGTGGGTGGAATGGAAAATGTGAAGTGGATAGATGGTGAGTCGTATGATGGTGTGGAGGAGAAGGCATTTCCATCGTTGGAGTATTTGTCAGTGCTGAATTTACTAAAATTGGAGAGAATGTTGAGAGAAGAAGGAGTAGAGATGCTTCCTCGTCTTTTTCTAATAAGAATTCATGGCGTCTCCAACCTTAAATTTCCACGTCTTCCTTCTGTTCAGCACCTTAGGATTTGGGATGGGACTTTCTTCAGGGAAGGGGTTGTGGAGAATATGCCTGGTCTAAAGACCTTGGATATTGATTTCATTAAAGGACAGGTGGTATTACCCGACCAACTCAGTGGGTTGGGTGCACTACGGGAACTAAGCATTGGTCTTTGGGATGATCTGGAGTATTTTTCAGAACATGTGTTGGAAGGTCTGAGCTCTCTTAAAATGTTGACTATTTCCTACTGTAAGAAATTAAAATCCTTATCTGAAGGTGTGCGACATTTGACACGTCTGAAGATTTTGATAGTCGATAAATGTCCAGAACTGGTGACTCTACCAAGCAATATGACCCTACTAACTGCCCTTCGGACTGTCACAATCGACGATTGCTCCACATTACCCTATGGCTTACAATGTGTCCCTTCCCTACGATCTTTGGATATAACTGGTTGCTCGTCTACTTCATTGCCGAACTGGTTGGGAGACATTACTTCTCTTCAAAAATTACAGATTTTGAACTGTGTGGAGTTGAGGTCACTACCGAGTAGCATTCAACGTCTCACCAACTTGTCTTCTTTAACTATAAGCGAATGTCCTTATCTGAAGAAGCGGTGCGAGAAGGAAACGGGAGACGATTGGCAATACATAAACCACATTCCAGAAATAAAACTCGTCACACTCCGAGAGGAAAAGACTTCAACATTTAGTGAAAGCATCGAGCGATCATCTCGCTCATGGAACTGCTTCAAACCTGCCATCAAAGTAGATGAGTAA 3360 0.4158 MAEALLEIVIENLGSFVQNQLATYWGLDQQAQKLSSNLTAIRAVLRDAERKQLTSHAVKDWLQKLTDAAYVLDDILDECSIQSIKEHSDDGQSSCLARVHPKDILFRFHIGKRMKDITQRFHDIHQERLTFELRVGVTEKQAVDDDDDDWRQTSSVITEPIFCGRDQDREKIVKFLLEDASNSEDLSIYPIVGMGGLGKTTLAKHVFNDHRVRNHFDLKVWICVSDDFNTKTILQSIIECCTRQNPNLNTLEALRKKVEEVLQSKRYLLVLDDVWNEDQEKGKDLKGMLQCARGAKGAAILVTTRLQEVASVMGTHPAYHLKELSGDDSWSLFKHHAFGPNREEIEELVTIGREIVRKCVGSPLAIKTLGSLLHDEGEVSQWENVKESEIWNIREESSCMTCEENSIMRALKLSYSNLELSMRRCFSFCAIFPKDFEIVKEELIHLWMANGLIKCERNVEVEDVGNKVWKKLYRRSFFQEAKSDDIGMIRSCKMHDLFHDLAQSIMGEECVVIEKGRLTQLSTRVHHLHVLNSDVSVDMAAFKKVESLRTFLDIGNIGHLPSNPCLRALRITSFVLSPLNDLAHLRYLSLDGNSRASLNNIICQLPKLQILKLQNMSQLRLPKDLTQLQDLRHIVINRNVSILEMPPNIGKLRHLRTLSTFVVGSETGCGLAELHSLKLGGTLKIEGLENVPNEWDAKQANLIGKKDLNILHLSWGGSANSEDSNVNVERVLEALQPPSTLKSFVMKRFKGRQLSSWMRNSSVLRDLVEVKLLNCENCEELPPLGKLPHLKRLEVGGMENVKWIDGESYDGVEEKAFPSLEYLSVLNLLKLERMLREEGVEMLPRLFLIRIHGVSNLKFPRLPSVQHLRIWDGTFFREGVVENMPGLKTLDIDFIKGQVVLPDQLSGLGALRELSIGLWDDLEYFSEHVLEGLSSLKMLTISYCKKLKSLSEGVRHLTRLKILIVDKCPELVTLPSNMTLLTALRTVTIDDCSTLPYGLQCVPSLRSLDITGCSSTSLPNWLGDITSLQKLQILNCVELRSLPSSIQRLTNLSSLTISECPYLKKRCEKETGDDWQYINHIPEIKLVTLREEKTSTFSESIERSSRSWNCFKPAIKVDE* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1339 1119 CDD RX-CC_like 2 124 IPR038005 -
Pvu2g1339 1119 Gene3D Ribonuclease Inhibitor 517 846 IPR032675 -
Pvu2g1339 1119 Gene3D - 421 504 IPR036388 -
Pvu2g1339 1119 Gene3D - 323 419 IPR042197 -
Pvu2g1339 1119 PRINTS Disease resistance protein signature 188 203 - -
Pvu2g1339 1119 PRINTS Disease resistance protein signature 261 275 - -
Pvu2g1339 1119 PRINTS Disease resistance protein signature 359 373 - -
Pvu2g1339 1119 PRINTS Disease resistance protein signature 931 947 - -
Pvu2g1339 1119 Pfam Rx N-terminal domain 6 93 IPR041118 -
Pvu2g1339 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 429 IPR027417 -
Pvu2g1339 1119 PANTHER OS10G0130600 PROTEIN 5 858 - -
Pvu2g1339 1119 Gene3D - 6 118 - -
Pvu2g1339 1119 Gene3D - 147 317 IPR027417 -
Pvu2g1339 1119 PANTHER DISEASE RESISTANCE PROTEIN RP 5 858 IPR044974 GO:0006952
Pvu2g1339 1119 Coils Coil 31 51 - -
Pvu2g1339 1119 Pfam NB-ARC domain 166 417 IPR002182 GO:0043531
Pvu2g1339 1119 SUPERFAMILY RNI-like 814 1068 - -
Pvu2g1339 1119 SUPERFAMILY L domain-like 479 915 - -
Pvu2g1339 1119 Gene3D Ribonuclease Inhibitor 858 995 IPR032675 -
Pvu2g1339 1119 Gene3D Ribonuclease Inhibitor 996 1073 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1339 Pvu-Chr2 26003445 26007254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1339 185 806 WRKY Transcription Factor Family AT5G45050 22.590 6.51e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1339 - - pvu:PHAVU_002G130100g 1716.44