Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1337 ATGGCCGAGGCTTTACTGGAAATCGTTATTGAAAATTTGGGATCTTTTCTTCAAAACCAACTTGCAACTTATTGGGGTGTTGAACAGCAGACCCTGAACCTTTCCAGCAATCTCACCGCAATCCGTGCTGTCTTCAAAGACGCTGAGAGAGAGCAACTAAGAAAGCATGCTGTGAAGGATTGGCTGCAAAAACTCACAGATGCAGCATATGTGCTGGATGATATCTTGGATGAATGTTCAATTCACTCCACAAAGATGCACTCTCATGATGGACATGCTTCATGCCTATCCCCTCTCCATCCTAAGGACATTCTCTTTCGTTTTCATATTGGCAAGAGGATGAAAGACATCACCCAAAGATTTCATGACATTCATGAAGAAAGGCTCACGTTTGAATTACGTGTGGGTGTCACAGAGAAGCAAGCAGTGAATGATGAGGATGATTGGCGCCAAACTGTCTCTGTGATTACCGAACCTATATTCTGTGGCAGAGACCAGGATCAAGAGAAAATTGTGAAGTTTCTCCTGGAAGATGCTAGTAACAGTGAAGACCTCTCCATCTATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACTCTTGCCAAGCAGGTCTTCAACGATCACGGGATAAGTAAACATTTTGACTTGAGAATTTGGATCTGTGTTTCAGATGATTTCAATGCGAAGAGAATACTGCAATCCATCATAGAATATGTCACTGGTCAAAACCCCAATCTCCATACTTTAGAAGCAATGCGGAAAAAGGTTGAAGAAGCATTGCAGTGCAAAAGGTATTTACTTGTTCTTGATGATTTGTGGAATGAAGAGCAAGAGAGGTGGAAGGAGTTAAAGGGGATGTTGCAGTGTGCAAGGGGAGCAAAAGGAGCTGCCATTTTGGTCACCACTCGACTGCAGGAAGTTGCCTCCATCATGGGGACACATCCTGCTTACCATTTGAAAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGGACAAAACAGAGAACAAATAGAAGAGCTCGTGACAATTGGCAGAGAGATAGTCAGAAAATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGCCTTTTGCGTGATGAAAGTGAGGTAAGCCAATGGGAAAATTTAAAGGAAAGTGAGATTTGGAATATACGTGAGGAAAATTCTATTATGCGTTTTTTGAAACTGAGTTATTCTAATTTGGAGTTGTCTCTAAGGAGATGTTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGATAAGGAAGATCTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAACGTAGGAGTGGAGGATGTTGGAAATAAAGCGTGGAAAAAATTATACCGTAGATCATTTTTTCAAGAAGCAGAGTCTGATGAGTTTGGTATGATTAGAAGTTGCAAGATGCATGATCTATTTCATGATCTTGCCAAGTCTATTATGGGTGAAGAATGTGTGATTATTGAGAAAGGAAGGTTGACTCAGTTGCCAACTAGAGTTCACTATGTAAGCTTGTCAAATTCTAAGGTGTCTGTTGATATTACTGCTTTCAAGAAAGTTGAATCCCTGCGGACTTTTATAGATTTTGGTAATAAATGTCTGGTGCCATCAACCCATTGTCTCCGAGCATTATGCACACGTTCTTCTCTGTTTTACCCACTCAAGGATTTAGGACATTTGAGATACTTGAGTTTGAATTGGGGTTCGGGAGCAAGCTTAAATAACATAATTTGTCAGTTGCCGAAATTGCAAATATTGAAACTGCAACATCTCAGTCAACTTAGGCTGCCCAAAGAATTGACACAATTACAGGATCTAAGACATATTGTGCTTAATAACTGTAAGTCAATATCAGAGATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTGAACACTTTCGTTGTGGGTTCAAAGGCAGGGTGTGGGTTAGCAGAGTTGCATAGCTTAAAGTTGGGAGGCAAGCTAAGAATTGAAGGCCTTGAGAAGGTCCCCAATGAATGGGATGCTAAACAAGCAAATTTGATTAGTAAGAAGGACTTGAATATCCTACGCTTGTCATGGGGTGGTAGTGCTAATTCAGAAGGTAGTAATGTCAACGTTGAGAGAGTACTGGAAGCCCTACAACCTCCCTCAACTCTGAAGAGTTTTAGGATAAATGGATATCCAGGAAGACATTTATCGAGTTGGATGAGAAATGGGGGAGTTCTGAGAGACTTGGTGGAAGTTATACTCTTGGACTGTGACAACTGTAAGGAGCTTCCTCCACTTGGTAAACTACCACACTTGAAAAGGCTAGAAGTGGGTGGAATGAAAGATGTGAAGTGGATAGATGGTGAGTCGTATGATGGTGTGGAGGAGAAGGCATTTCCATTGTTGGAGAAATTGAGTGTGGAGAAATTACCAAAATTGGAGAGGATGTTGAGGGAAGAAGGAGTAGAGATGCTCCCTCGTCTTTCTCAATTAAAAATTGTTGGCGTCTCCAACCTTAAATTTCCACGTCTTCCTTCTGTTAAGAAGGTATCTATTTTCGAAGCTGCTTCCTTGATGGAAGGGGTTGTGGAGAATATGCCTTGTCTAAAGACCTTGCATATTATAAGTGTTAGAGGAGTGGTTGTATTACCCGACCAACTCAGCGGGTTGGGTGCACTACAGGAACTAGACATTATTTCTTGTGATAGTCTGGAGTATTTTTCAGAACACGGGTTGGAAGGTCTGACCTCACTTAGAAGTTTGCGTATTTCCAACTGTGAGAAATTGAAATCATTATCTGAAGGTGTGCGACATTTGACATGTTTGGAGAGTTTGAGTATCATGAATTGTCCAGAGCTGGTGACTCTACCAAGCAATATGACCCAACTAACTACCCTTTGGAATGTCAGAATCTCTAGTTGCTCCACATTACCCTATGGCATACAATGTGTCCCCTCCCTACGAACTTTGTATATAATAAATTGCAAATCTATTTCATTGCCGGAGTGGATGGGAGACATGACTTCCCTTCAAAAATTAGAGATTTGGTTTTGTAGGGAGTTGAGGTCAGTACCGAGTAGCATTCAACGCCTCACCAACTTGTCTTCTTTAACTATAAGCGAATGTCCTTATCTGAATAAGCGGTGCAAGAGGGAAACGGGAGAGGATTGGCAATACATAAACCACATTCCAGAAATAAAACTCCTCCCACTCTATGAGAAAAAGATTTCAAGATTTAGTGAGAGCTCATGGAACTGCTTCAAGCAGCCATCAAATGACTGA 3309 0.4119 MAEALLEIVIENLGSFLQNQLATYWGVEQQTLNLSSNLTAIRAVFKDAEREQLRKHAVKDWLQKLTDAAYVLDDILDECSIHSTKMHSHDGHASCLSPLHPKDILFRFHIGKRMKDITQRFHDIHEERLTFELRVGVTEKQAVNDEDDWRQTVSVITEPIFCGRDQDQEKIVKFLLEDASNSEDLSIYPIVGMGGLGKTTLAKQVFNDHGISKHFDLRIWICVSDDFNAKRILQSIIEYVTGQNPNLHTLEAMRKKVEEALQCKRYLLVLDDLWNEEQERWKELKGMLQCARGAKGAAILVTTRLQEVASIMGTHPAYHLKELSGDDSWSLFKHHAFGQNREQIEELVTIGREIVRKCVGSPLAIKTLGSLLRDESEVSQWENLKESEIWNIREENSIMRFLKLSYSNLELSLRRCFSFCAIFPKDFEIDKEDLIHLWMANGFIKSEGNVGVEDVGNKAWKKLYRRSFFQEAESDEFGMIRSCKMHDLFHDLAKSIMGEECVIIEKGRLTQLPTRVHYVSLSNSKVSVDITAFKKVESLRTFIDFGNKCLVPSTHCLRALCTRSSLFYPLKDLGHLRYLSLNWGSGASLNNIICQLPKLQILKLQHLSQLRLPKELTQLQDLRHIVLNNCKSISEMPPNIGKLRHLRTLNTFVVGSKAGCGLAELHSLKLGGKLRIEGLEKVPNEWDAKQANLISKKDLNILRLSWGGSANSEGSNVNVERVLEALQPPSTLKSFRINGYPGRHLSSWMRNGGVLRDLVEVILLDCDNCKELPPLGKLPHLKRLEVGGMKDVKWIDGESYDGVEEKAFPLLEKLSVEKLPKLERMLREEGVEMLPRLSQLKIVGVSNLKFPRLPSVKKVSIFEAASLMEGVVENMPCLKTLHIISVRGVVVLPDQLSGLGALQELDIISCDSLEYFSEHGLEGLTSLRSLRISNCEKLKSLSEGVRHLTCLESLSIMNCPELVTLPSNMTQLTTLWNVRISSCSTLPYGIQCVPSLRTLYIINCKSISLPEWMGDMTSLQKLEIWFCRELRSVPSSIQRLTNLSSLTISECPYLNKRCKRETGEDWQYINHIPEIKLLPLYEKKISRFSESSWNCFKQPSND* 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1337 1102 CDD RX-CC_like 2 124 IPR038005 -
Pvu2g1337 1102 Gene3D - 406 496 IPR036388 -
Pvu2g1337 1102 Gene3D - 6 118 - -
Pvu2g1337 1102 SUPERFAMILY L domain-like 469 883 - -
Pvu2g1337 1102 Gene3D Ribonuclease Inhibitor 983 1064 IPR032675 -
Pvu2g1337 1102 Pfam Rx N-terminal domain 6 90 IPR041118 -
Pvu2g1337 1102 Gene3D Ribonuclease Inhibitor 501 866 IPR032675 -
Pvu2g1337 1102 PRINTS Disease resistance protein signature 187 202 - -
Pvu2g1337 1102 PRINTS Disease resistance protein signature 260 274 - -
Pvu2g1337 1102 PRINTS Disease resistance protein signature 358 372 - -
Pvu2g1337 1102 PRINTS Disease resistance protein signature 922 938 - -
Pvu2g1337 1102 PANTHER DISEASE RESISTANCE PROTEIN RP 5 860 IPR044974 GO:0006952
Pvu2g1337 1102 PANTHER OS10G0130600 PROTEIN 5 860 - -
Pvu2g1337 1102 Gene3D - 322 405 IPR042197 -
Pvu2g1337 1102 SUPERFAMILY RNI-like 831 1056 - -
Pvu2g1337 1102 Pfam NB-ARC domain 165 408 IPR002182 GO:0043531
Pvu2g1337 1102 Gene3D Ribonuclease Inhibitor 867 982 IPR032675 -
Pvu2g1337 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 420 IPR027417 -
Pvu2g1337 1102 Gene3D - 145 316 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1337 Pvu-Chr2 25976333 25979913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1337 184 797 WRKY Transcription Factor Family AT5G45050 23.328 7.13e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1337 - - pvu:PHAVU_002G130100g 1664.43