Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1336 ATGGCCGAGATTTTACTGGGAACCGTGATTGAAACTTTGGAATCTTTTGTTCAAAACCAAATCGCAACTTATTGGGGTGTTGACCAGCAGACTCAGAAGCTTTCCAGCAACCTCACCGTAATCCGTGCTGTCCTCAGAGACGCTGAGAGAGAGCAACTAAGAAAGCATGCTGTGAAGAATTGGCTGCAAAAACTCACAGATGCAGCATATGTGCTGGATGATATCTTGGATGAATGTTCAATTCACTCCACAAAGATGCACTCTCATGATGGACATACTTCATGCCTATCCCCTCTCCATCCCAAGGACATTCTCTTTCGTTTTCATATTGGAAAGCGGATGAAAGACATCACTCAAAGATTTCATGACATTCATGAAGAAAGGCTCACGTTTGAATTACGTGTGGGTGTCACAGAGAAGCAAGCAGTGGATGATGATGATGACGATTGGCGCCAAACTGTCTCTGTGATTACCGAACCTATATTCTGTGGCAGAGACCAGGATCAAGAGAAAATTGTGAAGTTTCTGCTGGAAGATGCTAGTAATAGTGGAGACCTCTCCATCTATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACTCTTGCCAAGCAGGTCTTCAACGATCACGGGATAAGTAAACATTTTAACTTGAGAATTTGGATCTGTGTTTCAGATGATTTCAATGCGAAGAGAATACTGCAATCCATCCTGGAATATGTCACTAGTCAAAACCCCAATCTCCATACTTTAGAAGCAATGCGGAAAAAGGTTGAAGAAGCATTGCAGAGCAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAGGAGTTAAAGGGGATGTTGCAGTGTGCAAGGGGAGCAAAAGGAGCTGCCATTTTGGTCACCACTCGACTGCAGGAAGTTGCCTCCGTGATGGGGACGCATCCTGCTTACCATTTGAAAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGGACCAAACAGAGAGGAAATAGAAGAGCTCGTGACAATTGGCAGAGAGATAGTCAGAAAATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGTCTTTTGCGTGATAAAAGTGAGGTAAGCCAATGGGAAAATGTAAAAGAAAGTGAGATTTGGAATACACGAGAGGAAAATTCTATCATGCGTGCTTTGAAATTGAGTTATTCTAATTTGGAGTTGTCTCTGAGGAGATGCTTTTCTTTTTGTGCAATTTTCCCGAAAGATTTTGAAATAGACAAGGAAGATCTAATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAACGTAGAAGTGGAGGATGTTGGAAATAAAGTCTGGAAAAAATTATACCGTAGATCATTTTTTCAAGAAGCAAAGTCTGATAAGCTTGGTATGATTAGAAGTTGCAAGATGCATGATCTATTTCATGATCTTGCCCAGTCTATTATGGGTGAAGAATGTGTGATTATTGAGAAAGGAAGGTTGACTCCGTTGTCAACTAGAGTTCACTATGCAAGCTTGTTAAATTCTAAGATGGTTGTTGATATGACTGCTTTCAAGAAAGTTGAATCCCTGCGAACTTTTCTAGATTTGGGTGATATTGGCTTGGTGCCATCAACCCATTGTCTCCGAGCATTATGCACAACTTCTTATTCGTTGTTCCCAGTCAAGGATTTAAGTTGGAATTGGGGTTCGGGAGAAGGCTTATGTAACATAATTTGTCAGTTGCCCAAATTGCAAATATTGAAACTAGAAGATCTCTTCCACCTTAGGCTGCCCAAAGAATTGACACAATTACAGGATCTAAGACATATTGTGATTGATGACTGTGATGTAAAAGAGATGCCTCCGAATATTGGCAAGTTAAGGCATTTAAGAACACTAAACACTTTCGTTGTGGGATCAAAGGCAGGGTGTGGATTAGCAGAGTTGAATAGCTTAAAGCTGGGAGGCACGCTGAGAATCGAAGGCCTTGAGAACGTCCCCAATGAATGGGATGCCAAACAAGCAAATTTGATTGGTAAGAAGGAGTTGAATATCCTACACTTGTCATGGGGTGGTAGTGCTAATTCAGAAGGTAGTAATGTTAACGTTGAGAGAGTACTGGAAGCCCTGCAACCTCCCTCAACTCTGAAGTGTTTTGTGATGAAAGGGTATAAAGGGAGACAGTTATCGAGTTGGATGAGAAATGGTACATTTCTGAGAGACTTGGTGGAAGTTAAACTCTTGGACTGTAACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACAATTGAAAATACTAGACGTGGGTGGAATGAAAAATGTGAAGTGGATAGATGGTGAGTCGTACGAAGGTGTGGAGGAGAAGGCGTTTCCATCGTTGGAGAAGTTGAGGGTGGTGAATTTACCAAAATTGGAGAGGATGTTAAGGGAAAAAGGAGTAGAGATGCTACCTCATCTTTATCAATTAAAAATTGATGGTATTTGGGAAGTGGCTTCCTTCATGGAAGGGGTTGTGGAGAATGTGTCGACCTTGGATATTATACGTATTAAAGGACTGGTGGTATTACCCGACCAACTCAGGGGGTTGGGTTCACTACAAGAACTATTGATTGAATCTTGTGATGATTTGGAGTATTTCCCAGAACATGTGTTGGAAGGTCTGACCTCTCTTCGAAGTTTGAGAATTAGCAACTGTCAGAACTTAAAATCCTTATCTGAAGGTGTGCGATATCTGACATGTCTGGAAAGTTTGAGAATCTGGTCTTGTCCAGAGCCGGTAACTATACCAAGCAATATGACCCAACTAACTGCTCTTCGGACTGCCGTAATCGGGGGTTGCTCCACATTACCCTATGGCTTACAATGTGTCCCCTCCCTACAGACTTTGGTTACAATCGATTGCAGGTCTACTTCATTGCCGGATTGGCTGGGAGACATGACTTCTCTTCAAAAATTAGAGATTTATAACTGTGAGGAGTTGAGGTCAGTACCGAGTAGCATTCAACGCCTCACCAACTTGTCTTTAACTATGAGCGATTGTCCTTATCTGATGAAGCGGTGCGAAAGGGAAACGGGAGAGGATTGGCAATACATAAAGCACATTCCAGAAATACAACTCGCCGGAGTCCGACTCCGAGAGGAAAAGACTTCAAAATTTTGTGCTTTGAGTGATATTGGTGGATGA 3219 0.4209 MAEILLGTVIETLESFVQNQIATYWGVDQQTQKLSSNLTVIRAVLRDAEREQLRKHAVKNWLQKLTDAAYVLDDILDECSIHSTKMHSHDGHTSCLSPLHPKDILFRFHIGKRMKDITQRFHDIHEERLTFELRVGVTEKQAVDDDDDDWRQTVSVITEPIFCGRDQDQEKIVKFLLEDASNSGDLSIYPIVGMGGLGKTTLAKQVFNDHGISKHFNLRIWICVSDDFNAKRILQSILEYVTSQNPNLHTLEAMRKKVEEALQSKRYLLVLDDVWNEDQEKWKELKGMLQCARGAKGAAILVTTRLQEVASVMGTHPAYHLKELSGDDSWSLFKHHAFGPNREEIEELVTIGREIVRKCVGSPLAIKTLGSLLRDKSEVSQWENVKESEIWNTREENSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIDKEDLIHLWMANGFIKSEGNVEVEDVGNKVWKKLYRRSFFQEAKSDKLGMIRSCKMHDLFHDLAQSIMGEECVIIEKGRLTPLSTRVHYASLLNSKMVVDMTAFKKVESLRTFLDLGDIGLVPSTHCLRALCTTSYSLFPVKDLSWNWGSGEGLCNIICQLPKLQILKLEDLFHLRLPKELTQLQDLRHIVIDDCDVKEMPPNIGKLRHLRTLNTFVVGSKAGCGLAELNSLKLGGTLRIEGLENVPNEWDAKQANLIGKKELNILHLSWGGSANSEGSNVNVERVLEALQPPSTLKCFVMKGYKGRQLSSWMRNGTFLRDLVEVKLLDCNNCEELPPLGKLPQLKILDVGGMKNVKWIDGESYEGVEEKAFPSLEKLRVVNLPKLERMLREKGVEMLPHLYQLKIDGIWEVASFMEGVVENVSTLDIIRIKGLVVLPDQLRGLGSLQELLIESCDDLEYFPEHVLEGLTSLRSLRISNCQNLKSLSEGVRYLTCLESLRIWSCPEPVTIPSNMTQLTALRTAVIGGCSTLPYGLQCVPSLQTLVTIDCRSTSLPDWLGDMTSLQKLEIYNCEELRSVPSSIQRLTNLSLTMSDCPYLMKRCERETGEDWQYIKHIPEIQLAGVRLREEKTSKFCALSDIGG* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1336 1072 CDD RX-CC_like 2 124 IPR038005 -
Pvu2g1336 1072 Pfam Rx N-terminal domain 6 90 IPR041118 -
Pvu2g1336 1072 PRINTS Disease resistance protein signature 188 203 - -
Pvu2g1336 1072 PRINTS Disease resistance protein signature 261 275 - -
Pvu2g1336 1072 PRINTS Disease resistance protein signature 359 373 - -
Pvu2g1336 1072 PRINTS Disease resistance protein signature 897 913 - -
Pvu2g1336 1072 Gene3D - 148 317 IPR027417 -
Pvu2g1336 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 421 IPR027417 -
Pvu2g1336 1072 Gene3D Ribonuclease Inhibitor 957 1065 IPR032675 -
Pvu2g1336 1072 Gene3D Ribonuclease Inhibitor 514 845 IPR032675 -
Pvu2g1336 1072 Pfam NB-ARC domain 166 409 IPR002182 GO:0043531
Pvu2g1336 1072 Gene3D - 323 411 IPR042197 -
Pvu2g1336 1072 Gene3D Ribonuclease Inhibitor 846 954 IPR032675 -
Pvu2g1336 1072 SUPERFAMILY RNI-like 801 1027 - -
Pvu2g1336 1072 PANTHER DISEASE RESISTANCE PROTEIN RP 5 838 IPR044974 GO:0006952
Pvu2g1336 1072 PANTHER DISEASE RESISTANCE PROTEIN RP 875 919 IPR044974 GO:0006952
Pvu2g1336 1072 PANTHER OS10G0130600 PROTEIN 875 919 - -
Pvu2g1336 1072 PANTHER OS10G0130600 PROTEIN 5 838 - -
Pvu2g1336 1072 Gene3D - 413 496 IPR036388 -
Pvu2g1336 1072 SUPERFAMILY L domain-like 485 838 - -
Pvu2g1336 1072 Gene3D - 6 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1336 Pvu-Chr2 25964768 25968293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1336 185 791 WRKY Transcription Factor Family AT5G45050 21.726 2.48e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1336 - - pvu:PHAVU_002G130700g 1571.21