Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1332 ACTCAAAAGCTTTCCAGCAATCTCACTGCAATCCGTGCTGTACTCAAAGATGCTGAGAAAAAGCAAATAACAAGCGAGGTCCTCAAGAATTGGCTGCAGAAACTCACAGATGCAGCATATGTGCTTGATGATATCTTGGACCAATGTTCAATTCACTCCACAAAGGTCCACTCTGATGAAGGACATGCTTCATGCCTATCCCCTCCCCATCCTAAAGACATTCTCTTTCGTTTCAATATTGGCAAAAGGATGAAAGACATCACCCAAAGATTTCATGACATTCATGAAGAAAAGAGCAGGTTTAATTTAGAACTTGGGGTCACCGAGGTGCAAACAGTGGATGATGATTGGCGCCAAACTAGCTCTGACATTACAGAACCTACACTCTATGGCAGAGACAAGGACCGGGAGCAAATTATGAAATTTCTTCTGGAAGATGCCAGTAACAGTGAAGACCTCTCCGTCTATCCCATAGTTGGTATGGGTGGACTCGGCAAAACAACACTTGCCAAGCAGGTCTTCAATGATCACAAGGTATGCAAACACTTTGACTTGAGAATTTGGGTTTGTGTTTCTGATGATTTCAACACCAAGACAATACTAGAATCCATCATAGAATCTTGCACTGGACAAAATCCCAATCTCAATACCTTAGAAGCAGTGCGGAAAAAGGTTGAATTAGTGTTGCTGAACAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAAGCAGTTGAAGGGAAAGTTGCAGTGTGCAAGGACATCAAAAGGAGCTACCATTTTGGTCACCACTCGACTCCAGGAAGTTGCTTCCACCATGGAGACGCATCCTGTTTACCATTTGACAGAATTGTCAGGAGACGACAGTTGGTCATTGTTCAAACACCATGCGTTTGGACAAAACAGAGAAGAAATAGAAGAGCTTGTGGCAATTGGCAGAGAGATAGTGAGAAGATGCGTTGGTTGGCCACTTGCAATCAAAACACTGGGAAGTCTTTTGCGTGATAAAAGTGAGATAAGCCAATGGGAAAATGTAAAAGAAAGTGAGATTTGGGATATACGAGAGGAAAGTAGTTGTATGACATGTGAGGAAAATTCTATCATGCGTGCTTTGAAACTGAGCTATTCTAATTTGGAGTTGTCTCTCAAGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGTAATAGTGAAGGAAGATCTCATTCATCTCTGGATGGCTAATGGATTTATTAAATCTGAAGGAAACGTAGAAGTGGAAGATGTTGGAAATAAAGTGTGGAAAAAATTATACCGTAGATCATTTTTTCAAGAAGCAAAGTCTGATAAGTTTGGTATGATTACAAGCTGCAAGATGCATGATCTATTTCATGATCTTGCCAAGTCTATTACGGGTGAAGAATGTGTGGTTATTGAGGAAGGAAGGTTGTCTGCGTTGTCAACTAGAGTTCACTATGTAAGCTTGTCAAATTCTAAGATGTCTGTTGATATGACTGCTTTCAAGAAAGTTGAATCCCTGCGAACTTTTATGGATTTTAGTAATATTGGTCTGGTGCCATCAACCCATTGTCTTCGAGCATTGTGCACAACTTCTTATTGGTTGTCCCCAGTCAATGATTTAGCACATTTGAGATACTTGAGTTGGAATAGGGGTTCGGGAGCAGCCTTATATAAATTAATTTGTCAGTTGCCGAAATTACAAATATTGAAACTACAAAGTATGAGCCAACTTAGGCTGCCCAAAGAATTGACGCAATTACAGGATCTAAGACATATTGTGATTAATAATTGTGATCCAATACCAGGGATGCCTCCGAATATTGGCAAGTTAAGGCATCTAAGAACACTGAGCACTTTTGTTGTGGGATCACAGGCAGGGTGTGGGTTAGCAGAGTTGCATAGCTTAAAGCTGGGAGGCATGCTGAGAATCAAAGGCCTTGAGAACGTCCCCAATGAATGGGATGCTAAACAGGCAAATTTGATTGGTAAGAAGGACTTGAATATCCTACATTTGTCATGGGGTGGTAGTGCTAATTCAAAAGGTAGTAATGTTAACGTTGACAGAGTACTGGAAGCCCTGCAACCTCCCTCAACTCTGAAGAGTTTTGTGATGGCAGGATATCAGGGGAGACAATTATCGAGTTGGATGAGAAATGGTTCAGTTATGAGAGAGTTGGTGGAAGTTAGACTCTTGGACTGTGACAACTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACACTTGAAAAGGCTAGATGTGCGTGGAATGAAAAATGTGAAGTGGATAGATG 2317 0.4104 TQKLSSNLTAIRAVLKDAEKKQITSEVLKNWLQKLTDAAYVLDDILDQCSIHSTKVHSDEGHASCLSPPHPKDILFRFNIGKRMKDITQRFHDIHEEKSRFNLELGVTEVQTVDDDWRQTSSDITEPTLYGRDKDREQIMKFLLEDASNSEDLSVYPIVGMGGLGKTTLAKQVFNDHKVCKHFDLRIWVCVSDDFNTKTILESIIESCTGQNPNLNTLEAVRKKVELVLLNKRYLLVLDDVWNEDQEKWKQLKGKLQCARTSKGATILVTTRLQEVASTMETHPVYHLTELSGDDSWSLFKHHAFGQNREEIEELVAIGREIVRRCVGWPLAIKTLGSLLRDKSEISQWENVKESEIWDIREESSCMTCEENSIMRALKLSYSNLELSLKRCFSFCAIFPKDFVIVKEDLIHLWMANGFIKSEGNVEVEDVGNKVWKKLYRRSFFQEAKSDKFGMITSCKMHDLFHDLAKSITGEECVVIEEGRLSALSTRVHYVSLSNSKMSVDMTAFKKVESLRTFMDFSNIGLVPSTHCLRALCTTSYWLSPVNDLAHLRYLSWNRGSGAALYKLICQLPKLQILKLQSMSQLRLPKELTQLQDLRHIVINNCDPIPGMPPNIGKLRHLRTLSTFVVGSQAGCGLAELHSLKLGGMLRIKGLENVPNEWDAKQANLIGKKDLNILHLSWGGSANSKGSNVNVDRVLEALQPPSTLKSFVMAGYQGRQLSSWMRNGSVMRELVEVRLLDCDNCEELPPLGKLPHLKRLDVRGMKNVKWID 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1332 772 SUPERFAMILY L domain-like 460 765 - -
Pvu2g1332 772 Gene3D Ribonuclease Inhibitor 483 771 IPR032675 -
Pvu2g1332 772 PANTHER DISEASE RESISTANCE PROTEIN RP 2 770 IPR044974 GO:0006952
Pvu2g1332 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 396 IPR027417 -
Pvu2g1332 772 PANTHER OS05G0414200 PROTEIN 2 770 - -
Pvu2g1332 772 PRINTS Disease resistance protein signature 155 170 - -
Pvu2g1332 772 PRINTS Disease resistance protein signature 228 242 - -
Pvu2g1332 772 PRINTS Disease resistance protein signature 326 340 - -
Pvu2g1332 772 PRINTS Disease resistance protein signature 732 748 - -
Pvu2g1332 772 CDD RX-CC_like 2 94 IPR038005 -
Pvu2g1332 772 Pfam NB-ARC domain 133 384 IPR002182 GO:0043531
Pvu2g1332 772 Pfam Rx N-terminal domain 2 59 IPR041118 -
Pvu2g1332 772 Gene3D - 117 285 IPR027417 -
Pvu2g1332 772 Gene3D - 388 471 IPR036388 -
Pvu2g1332 772 Gene3D - 290 386 IPR042197 -
Pvu2g1332 772 Gene3D - 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1332 Pvu-Chr2 25880014 25882330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1332 152 771 WRKY Transcription Factor Family AT5G45050 21.681 4.25e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1332 - - pvu:PHAVU_002G130500g 1211.44