Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1323 ATGGAGTCCACTGAGCATGGGAGCGTGTCAGTTAGAGAGTTCCATGCGAATGGAAGCCGCATGGTTGCATCAGAAGTTGAGGCCAAGCTTGATCAAGGAAATATTCAAGAAGCAGAAGATTCGTTAAAAGAAGGATTGTCACTCAATTTTGAGGAAGCAAGAGCTCTTCTTGGTAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAACGGTTGCAATCTTCCTTTTCTGAAAAAACACCAGTCAAGAAAGGTCGTGCTCCCACTGAATCAGTCTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCCAAGTCTCTGCAAAAACTGGGGAAATTTACTGAGGCTGCTAATAATTGTAAACATATTCTTGATGCCGTTGAGAAGATATTTTATCTGGGTATTACTGATATTCAAGTGGATAATAAATTGCAAGAGATAGTCAGTCATGCAGTAGAGCTCCTTCCGGAGCTTTGGAAACAAGCTGGTTGCTATGATGAGGCAATCTCTGCTTATAGGCGAGCCCTTCTTAGTAAATGGAACCTTGATAATGATTACTGTGCAAGAATTCAGAAGTCATTTGTTATTATTTTGCTATACAGTGGGGTGGAGGCAAGTCCACCTAGTTTAGCAGTTCAGGTTGAGGGATCATATGTGCCTAAAAATAATCTTGAAGAGGCTATTCTGTTATTGATGATTCTTTTGAGAAAGTTTAGCCTTGGTAAGATGAAATGGGATCCTTCAGTCATGGAACACCTTACTTTTGCACTTTCTATATGTACCCAAACCTCTATTTTAGCAAAGCAACTTGAAGAATTGATGCCTGGAGTATACCATCGAATTGATTGTTGGAACTCTTTAGCTTTATGTTATAGTGGAGCTGGACAAAATGAATGTGCTTTGAGCCTGCTAAGGAAATCTTTGCACAAACATGAACGACCAAATGACCTTACATCATTATTGTTAGCAGCTCGCATCTGCAGTGAGGATTCCCATTTTGCTGCTGAGGGAGTGAACTATGCACTGAGGGCAGTCAATAATGCTCATGATCAAAAAGAGCATTTGAAAGGTGTTGCTCTTCGGATGTTGGGACTTTGTCTGGGAAAGCAAGCTAAGGTTTCTTCCTCTGACTCTGAGAGATCTCACCTTCAGTCCAAAGCTTTGGAGTCATTGGTGGCGGCAATCAAATTGGAGCCAAACAATTGTGATCTGATTTTTGAATTGGCTGTTCATTATGCACAACACCGAAATTTGTCTGCTGCTTTGCGCTCTGCGAGGCATTTCTTTAATCAAACAGGTGGTTCTGTGTTGAAAGCTTGGAGATTGCTTGCTCTAATTTTGTCAGCACAGCAAAGATTTTCAGAAGCTGAAGTTGTGATAGATGCTGCTTTAGATCAGACTGCAAGATGGGAGCAGGGGCCACTGCTTAGGCTGAAAGCAAAGCTGAAGATCTCCCAATCACGACCCATGGATGCTATTGAAACCTATAGATACCTTCTTGCATTGGTTCAAGCCCAGAAGAAATCCTTTGGGTCATTCCAAATTAGTTCAAAGGTTTTGGATGATAAAATAAATGAATTTGATATTTGGCATGGTCTGGCAAATTTATATGGTAGTCTTTCTCATTGGAAGGATGCTGAAATCTGTCTGCAGAAGGGGAGGGAGTTGAAGAAATACTCTGCAGCATTAATGCACACTCAAGGGGTTTTGTTTGAAGGGCGTGGGCAATATGAAGATGCTCTTCTTGCTACTATTAATGGTGTACTAATTGAACCAAACCATGTTCCATGCAAGATCTTGATGGGTTCTATGATTCAAAAAATAGGCCCAAAGTATTTGGCTGCTGCAAGAAGCTCAATGTCTGATGCAATCCGAATAGAACCCACTAACCGCATGGCTTGGCATTACTTGGGATTGCTTAACAAGAAAGATGGCCGAATAAGTGATGCCGCTGACTGCTTCCAAGCAGCTTCAATGCTTGAAGAATCTGATCCCATCGAAAGTTTCAGCTCTATACTTTGA 2082 0.4164 MESTEHGSVSVREFHANGSRMVASEVEAKLDQGNIQEAEDSLKEGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQSSFSEKTPVKKGRAPTESVSVSQHAASLVLEAIYLKAKSLQKLGKFTEAANNCKHILDAVEKIFYLGITDIQVDNKLQEIVSHAVELLPELWKQAGCYDEAISAYRRALLSKWNLDNDYCARIQKSFVIILLYSGVEASPPSLAVQVEGSYVPKNNLEEAILLLMILLRKFSLGKMKWDPSVMEHLTFALSICTQTSILAKQLEELMPGVYHRIDCWNSLALCYSGAGQNECALSLLRKSLHKHERPNDLTSLLLAARICSEDSHFAAEGVNYALRAVNNAHDQKEHLKGVALRMLGLCLGKQAKVSSSDSERSHLQSKALESLVAAIKLEPNNCDLIFELAVHYAQHRNLSAALRSARHFFNQTGGSVLKAWRLLALILSAQQRFSEAEVVIDAALDQTARWEQGPLLRLKAKLKISQSRPMDAIETYRYLLALVQAQKKSFGSFQISSKVLDDKINEFDIWHGLANLYGSLSHWKDAEICLQKGRELKKYSAALMHTQGVLFEGRGQYEDALLATINGVLIEPNHVPCKILMGSMIQKIGPKYLAAARSSMSDAIRIEPTNRMAWHYLGLLNKKDGRISDAADCFQAASMLEESDPIESFSSIL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1323 693 SUPERFAMILY TPR-like 117 442 IPR011990 GO:0005515
Pvu2g1323 693 Gene3D Tetratricopeptide repeat domain 532 688 IPR011990 GO:0005515
Pvu2g1323 693 Gene3D Tetratricopeptide repeat domain 23 208 IPR011990 GO:0005515
Pvu2g1323 693 PANTHER CALMODULIN-BINDING PROTEIN 1 692 - -
Pvu2g1323 693 PANTHER PROTEIN NPG1 1 692 IPR043376 -
Pvu2g1323 693 SUPERFAMILY TPR-like 403 677 IPR011990 GO:0005515
Pvu2g1323 693 SUPERFAMILY TPR-like 30 201 IPR011990 GO:0005515
Pvu2g1323 693 Gene3D Tetratricopeptide repeat domain 230 529 IPR011990 GO:0005515
Pvu2g1323 693 SMART tpr_5 457 490 IPR019734 GO:0005515
Pvu2g1323 693 SMART tpr_5 547 580 IPR019734 GO:0005515
Pvu2g1323 693 SMART tpr_5 651 684 IPR019734 GO:0005515
Pvu2g1323 693 SMART tpr_5 301 334 IPR019734 GO:0005515
Pvu2g1323 693 SMART tpr_5 581 614 IPR019734 GO:0005515
Pvu2g1323 693 SMART tpr_5 117 150 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1323 Pvu-Chr2 25777792 25784029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1323 11 693 Calmodulin-binding Proteins AT2G43040 69.578 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1323 K21843 - gmx:100814609 1165.98