Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1317 ATGAAGTATTTTGCTTTCATCTTCCTCACACTGTGCTTTACCCCAAACACAGAAGGCTTTACATCAGGAAATGATACTGATAATCTAGCATTGCTGAAATTCAAGGCCTCCATATCCAATGATCCATATGGAATCTTCCTCTCCTGGAATACTTCTTCTCACTTTTGTAACTGGCATGGAGTCACATGCAATTCCATGCTTCAAAGAGTTACACACTTGAACTTGCAGGGATGCAAGTTGAAGGGATTCATATCTCCCCATGTTGGCAATCTTTCTTTTATGAAAGATTTCAACATTGCAAACAACAACTTCCACGGCAAAATCCCACAAGAGTTAGGATTGTTGTCACAATTACAACAACTCTCTCTTCAAAATAACTCCTTAGTAGGTGAAATTCCTACAAATTTGACAGGATTTGCTCATCTCACAAGTTTACTCTTGAATGGGAACAATCTCACTGGAAAAATACCTGTTCAAATTGTCTCACTTCGAAAGCTTCAACTTCTTGCCCTTTATAGGAATCATTTGACAGGAGTAATCCCATCCTTCATAGGAAATATTTCATCTTTGATTCGTTTCTCTGTGTCTGAAAACAATTTAGAGGGAGGTGTTCCACAAGAAATATGTCATCTGAAAAGCTTGACACTTCTATCACTTAATTTCAACAAACTAAGTGGAACAATTCCTTTGTGTGTTTATAATATGTCCTCTCTTACTGTGATCTCAGCTACAGAAAATCAGCTCAATGGCTCCCTTCCACCCAACATGTTTCACACCCTCTCCAATCTCCAAACATTTTATTTTAATCTCAACCAAATCTCAGGCTCAATCCCACCATCCATCTCAAATGCATCTAATCTTTCAATATTTGAAATGGGTGGAAACAAACTTACTGGACGAGTTCCAAGTATGGGGAATCTACAAGATCTTTATTATTTTGTTGTTGATAAAAACTTTCTTGGTGAAAATTCAGTTGATGATTTGGTGTTTTTAGAATCATTAACAAATTGTAGTAAGTTGAATGTCTTAGATTTAGCCTACAATAATTTTGGTGGCCATTTGCCAAATTATTTGGGCAACTTATCCAATCAACTCCCTCAACTATATCTTGGAGGTAATCAGATATCTGGGGAAATTCCTGCTGCACTTGGTAATCTAATTGGCTTAAATATTTTGGCCATGGAAAATAACTATATCACTGGGAATATCCCAACAACTTTTGGAAAGTTTCAGAAAATGGAGTTTTTAAATTTGGGCTCAAACAAGTTGTCAGGAGACATTAAAGACTGGATAGGGAATCTTAGTCAATTGTTTCATCTGGAAATAGGAGAAAATATGTTACGAGGAAATATTCCACCAAGTCTAGGAAACTGTCAAAAGTTACAATACTTAGACATTTCGGATAACAACCTTACAGGAATCATACCAATAGAGGTTTTTAAGCTTTCATCTCTAACAAACGTGTTGGGTTTGTCACAAAACTCATTGAGTGGTAGTATACCAAAAGAAGTGGGCAATTTAAAAAACCTTAATTCGTTGTATATGTCTGATAATCATCTCTCGGGTGTCATTCCTGATAGCATTGGAAAATGCATAATGTTGGAAGAAATCTATTTGGAAGGGAATTCTTTACAAGGAAGCATACCATCCTCTTTGGCATCACTCAAAGGACTTGAAAAGTTAGACCTCTCACGAAACCAATTATCTGGATCAACTCCTAATGTTCTGCAGACTATTTCATTCTTAGCATACTTGAATGTGTCATTTAACATGTTGGATGGTGAGGTGCCAACTGAAGGTGTCTTCCGAAATGCAAGTGGGGTAGTGATTTCTGGAAATAGTGGCCTTTGTGGAGGTATTTCAAAACTACAGCTACCCTCATGTCCTGTCAAAGGTAAGAAACTTGTAAAACACAAGTTCAAGTTGATCATAGTGTCAGTGATGGTTAGTGTGGTTGTTGTTTTTCTCATGCTAGTTATTCTAACTATCTATTGGATGAGGAAAAAGACTAAAAAAGCATCTTTGGATTCGCCAACAATTAACCTGCTAGCTAAAGTTTCATACCAAAGCCTATACAATGGAACTGATGGCTTCTCAGTTACAAATTTGATAGGGTGTGGGATTTTTAGTTCTGTCTATAAAGGAACTCTTGAGTCAGAAGATAAAGTAGTTGCCATAAAGGTTCTAAACCTTAAACATAAAGGATCTCACAAGAGTTTCCTTGCTGAATGCAATGCACTGAGAAGCATTAAACATAGAAATCTGGTTCAGATTTTGACGTGTTGTTCTAGCACAGATTACAAAGGTCAGGAATTTAAAGCTTTAATTTTTGAGTACATGAGAAATGGAAGCTTGGAGCAATGGTTACACCCTGAAGAACATCCAAGATTATTGAGTCTTGATCAAAGATTAAATATCATCATTGATGTAGCTACTGCCTTAAATTATCTTCACCATGATTGTGAGCCAACAATCATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGATGATATGATTGCTCATGTGAGTGATTTTGGCATAGCTAGATTTCTCTCAGCTACAACTGATGCCACCACTTCTAAGAAAACAAGTACAATTGGAATAAAGGGTACTGTTGGCTATGCTCCTCCAGAGTATGGAATGAGCTCTGAGGTATCTACTTTGGGGGACATGTATAGCTTTGGAATTCTGGTGTTGGAGATTCTAACAGGCAGAAGACCTACAGATAAAGTGTTTGAAGATGGTCTAAATCTTCATAACTTTGTTTCAATTTCATTTCCTAGTAATCTTCTGCAAATTTTGGACCCACAACTTGTTCCAACATATGAACCAACAACATTGGATGGAAACAACTCACATCTTAATCGAAATGTCAAGGAATGCATAGTTTCACTTTTCATAGTTGGACTTGCTTGTTCTAAGGAATCACCAAAAGAAAGAATGAGTGTGGTTGATCTTATCAAGGAGCTTAGTCGAATCAAAAGGGTCTTTCTTGCTGTTGCTGCTGGGTAA 3021 0.3688 MKYFAFIFLTLCFTPNTEGFTSGNDTDNLALLKFKASISNDPYGIFLSWNTSSHFCNWHGVTCNSMLQRVTHLNLQGCKLKGFISPHVGNLSFMKDFNIANNNFHGKIPQELGLLSQLQQLSLQNNSLVGEIPTNLTGFAHLTSLLLNGNNLTGKIPVQIVSLRKLQLLALYRNHLTGVIPSFIGNISSLIRFSVSENNLEGGVPQEICHLKSLTLLSLNFNKLSGTIPLCVYNMSSLTVISATENQLNGSLPPNMFHTLSNLQTFYFNLNQISGSIPPSISNASNLSIFEMGGNKLTGRVPSMGNLQDLYYFVVDKNFLGENSVDDLVFLESLTNCSKLNVLDLAYNNFGGHLPNYLGNLSNQLPQLYLGGNQISGEIPAALGNLIGLNILAMENNYITGNIPTTFGKFQKMEFLNLGSNKLSGDIKDWIGNLSQLFHLEIGENMLRGNIPPSLGNCQKLQYLDISDNNLTGIIPIEVFKLSSLTNVLGLSQNSLSGSIPKEVGNLKNLNSLYMSDNHLSGVIPDSIGKCIMLEEIYLEGNSLQGSIPSSLASLKGLEKLDLSRNQLSGSTPNVLQTISFLAYLNVSFNMLDGEVPTEGVFRNASGVVISGNSGLCGGISKLQLPSCPVKGKKLVKHKFKLIIVSVMVSVVVVFLMLVILTIYWMRKKTKKASLDSPTINLLAKVSYQSLYNGTDGFSVTNLIGCGIFSSVYKGTLESEDKVVAIKVLNLKHKGSHKSFLAECNALRSIKHRNLVQILTCCSSTDYKGQEFKALIFEYMRNGSLEQWLHPEEHPRLLSLDQRLNIIIDVATALNYLHHDCEPTIIHCDLKPSNVLLDDDMIAHVSDFGIARFLSATTDATTSKKTSTIGIKGTVGYAPPEYGMSSEVSTLGDMYSFGILVLEILTGRRPTDKVFEDGLNLHNFVSISFPSNLLQILDPQLVPTYEPTTLDGNNSHLNRNVKECIVSLFIVGLACSKESPKERMSVVDLIKELSRIKRVFLAVAAG* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1317 1006 PANTHER LRR RECEPTOR-LIKE KINASE 15 1002 - -
Pvu2g1317 1006 Gene3D Ribonuclease Inhibitor 327 629 IPR032675 -
Pvu2g1317 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Pvu2g1317 1006 ProSiteProfiles Protein kinase domain profile. 698 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1317 1006 Gene3D Transferase(Phosphotransferase) domain 1 780 1001 - -
Pvu2g1317 1006 Gene3D Phosphorylase Kinase; domain 1 680 779 - -
Pvu2g1317 1006 PRINTS Leucine-rich repeat signature 461 474 - -
Pvu2g1317 1006 PRINTS Leucine-rich repeat signature 555 568 - -
Pvu2g1317 1006 SUPERFAMILY Protein kinase-like (PK-like) 674 993 IPR011009 -
Pvu2g1317 1006 Gene3D Ribonuclease Inhibitor 26 136 IPR032675 -
Pvu2g1317 1006 Gene3D Ribonuclease Inhibitor 137 207 IPR032675 -
Pvu2g1317 1006 Pfam Leucine rich repeat 534 592 IPR001611 GO:0005515
Pvu2g1317 1006 Pfam Leucine rich repeat 164 224 IPR001611 GO:0005515
Pvu2g1317 1006 Pfam Leucine rich repeat 460 520 IPR001611 GO:0005515
Pvu2g1317 1006 ProSitePatterns Protein kinases ATP-binding region signature. 704 727 IPR017441 GO:0005524
Pvu2g1317 1006 SMART LRR_sd22_2 507 528 - -
Pvu2g1317 1006 SMART LRR_sd22_2 555 581 - -
Pvu2g1317 1006 SMART LRR_sd22_2 211 232 - -
Pvu2g1317 1006 SMART LRR_sd22_2 458 479 - -
Pvu2g1317 1006 SMART LRR_sd22_2 260 286 - -
Pvu2g1317 1006 SMART LRR_sd22_2 115 141 - -
Pvu2g1317 1006 SMART serkin_6 698 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1317 1006 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Pvu2g1317 1006 SMART LRR_typ_2 260 284 IPR003591 -
Pvu2g1317 1006 SMART LRR_typ_2 211 235 IPR003591 -
Pvu2g1317 1006 SMART LRR_typ_2 434 458 IPR003591 -
Pvu2g1317 1006 SMART LRR_typ_2 507 531 IPR003591 -
Pvu2g1317 1006 SMART LRR_typ_2 163 186 IPR003591 -
Pvu2g1317 1006 SMART LRR_typ_2 555 578 IPR003591 -
Pvu2g1317 1006 SMART LRR_typ_2 115 139 IPR003591 -
Pvu2g1317 1006 ProSiteProfiles Leucine-rich repeat profile. 460 481 IPR001611 GO:0005515
Pvu2g1317 1006 PANTHER OS04G0122200 PROTEIN 15 1002 - -
Pvu2g1317 1006 SUPERFAMILY L domain-like 364 618 - -
Pvu2g1317 1006 SUPERFAMILY L domain-like 26 319 - -
Pvu2g1317 1006 Pfam Protein kinase domain 700 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1317 1006 Gene3D Ribonuclease Inhibitor 208 326 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1317 Pvu-Chr2 25723489 25726621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1317 17 1004 Receptor kinase-like Gene Family AT3G47570 44.212 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu2g1317 Pkinase 8.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1317 - - gmx:102664380 1348.57