Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1312 ATGTCTCTCCTCAGCAGATTCTTCTACAAGCGTCCTCCTGATGGCTTACTGGAATTCGCGGACAGAGTCTATGTATTCGATTCCTGCTTCTCCACCGAAGCGCTTCCCGAGGGAATGTACCAGCTCTACCTCCGCCAAATTCTCTCCGACCTCCACGAGGACTTCCCGGAATCCTCCTTCCTCGCCCTCAACTTCCGCGACGGTCACACCCGCAGCCGCTTCTCACGCCTCCTCTGCGACCTCGACGCCACTGTCATCGACTACCCCAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCGCCCTCCTCCACCACTTCCTCCGCCTCTGTGACACCTGCCTCGCTGACCCCGCCGCCGTGGTCCTCTTCCACTGTGAGCGCGGCGGCTGGCCCCTCCTCGCCTTTCTCCTCGCTGCTTTCCTCGTTTTCCGGAAGGCGCAGAGTGGGGAGCGCAAGATTCTAGAGATGGTTCACAGGGAGGCGCCGAAGGGGCTGCTGCAGCTGCTGTCGGCGCTCAACCCGATGCCGTCGCAGCTGCGGTATGTGCAGTATGTGGCGCGGAGGAACATTGGCGCAGAGTGGCCTCCGCCGGAGAGGGCGCTTTCTCTGGATTGTGTGATACTAAGAGGGGTTCCTGGGTTTGATGGGGGAAATGGTTGCAGGCCGTTTTTTAGGATTTTTGGGAGGAATTTGCTTAGTAAAGGCGGGCTTTCCACGCAGATGATTTATAATATGCATAAGAAGAAGAAGAGTTTGAGGCATTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTACAAGGGGACGTGGTATTGGAGTGTGTGCATTTGGATTTGGATCCGGAGAGGGAGGTGATGATGTTTCGAGTGATGTTCAACACTGCTTTCATTCGATCAAACATTTTGATGCTGAATGCTGAGAACTTGGACATTCTGTGGGATTCAAAGGAGCGGTATCCAAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATAAGTCCTCAAAGGGCTCCCACAAGTATTTTAGATGGCGAGGTGAAAGGTGGATTACCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTCAGTGGCGCAGAATGGATTGACAGTGGTGATTCTGCTGCTGTATGGCTGCTCAAGCAGCTTACAGTCTTAAATGACCCCAAAGAGTTTTCAAGGTTTCAGGGTAGAGGAAGTTGGTATTCATCACCTGCTGACTCTGAAGAAGAAAACAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCTAGGTCTTATGCTGATCCTTCTAAATTATTTGCATCTGATACACCTGATTTGGTTCATTTAACTTTTGAAAATAACGGTGGAGATTATGTAAATCTAACTTCAACAACACCTAATCAGTCACTAACTGATGATGTTTCATTACCTCTTCATGCTCTAAGTAAGGAATCTTCTCCTTGTTTGTCTCCACCATCACCTTCACATGTTCCCGCTACTCAACCTCTTCATATACCAGCACCACTGCCTCCATCATCAATACCTGTACAGCCAAGTTTAGCTCCTCCCCATCCTCCCCCACCTCCGCATCCTTTAGTTCAGAATCTGAACAATGCTTCTACATTGCCTTCACCTCCTCCTCCACCCACTCTCCCCCCTATAGGTAGGGATGCGAATAGCTCTCCTGGTTTACCTCCACATCCTCTAGGATCTGTACAAACAAGTTCAGCCCCTCTACCACCACCTCCTCCTCCTCCTCTTCCTCCTGCTCCAGTACCTGTACAAAAAAATTTAGTCCCTCCTCCTCCAGGTCCTGTGCAAACAGGTTCAGCCCCACCACCACCACCACCACCACCTCCACCTCCTCCAGGTCTTGTACAAACAGGTTCTGTTCCGCCACCACCTCCACCTCCTCCTGGTCCTGGTCCTGGTCCTGTACGAACAGGTTCAGCTCCACCTCCGCCCCCTCCAGGTCTTGTACAAACAGGTTCTGTCCCGCCACCACCTCCACCTCCACCTCCACCTCCTTTTGGTCCTGTACGAACAGGTTCAGCTCCACCTCCACCTCCACCACCACCTCCTCCAGGTCCTGTACAAACAGGTTCAGCTCCACCTCCACCTCCGCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCTCCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAACTCCACCACCACCACCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCACCACCTCCTCCTCCAGGTTCTGTACGAACAGGTTCAGCTCCACCACCACCACCTCCTCCTCCAGGTTCTGTACGAACAGGTTCAGCTCCACCACCACCACCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCACCTCCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCACCTCCACCTCCCCCAGGTGCTGTACGCACAGGTTCAGCTGCACCACCACCTCCACCTCCTCCAGGTCCTGTACGCACAGGTTCAGCTGCACCACCACCTCCACCTCCTCCAGGTCCTGCACAAACAGGTTCGGCACCACCACTGGCCCCAAAGCCCCCAGGTGCTCCTCCTCCTCCACCTGGTCGTGGTGCATCTCCAATGCCACCTCCACCTCCTGCAGCTACAGGCTCTGGTGTGGCACCACCACCTGGCAAAGCTTCAACAACAAATGTTGGTAGAGCTCATGGTATTGGTGTTACTGTTAATGCTCCAAAGAAAACTTTGCTAAAACCTCTACACTGGGTGAAAGTGGCCCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGCGGACCAAGGGCCCCTGAGATAGATATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTGCATCTGATGGGAGTAGTGCTAAAGGTGGAGGTCGGCGTGGTCCTAATATTAACAAACCGGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAACTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAAAGCGGTACTGGCATTGGATTCTGTAGTTCTTGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCAACAAAGGAAGAGATGGAAGTGTTAAAGAATTATACAGGAAACAAGGAAATGCTTGGCAAGTGTGAACAGTTTTTTATGGAGCTGATGAAAGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCGCAGGTAAACGATTTGAAGGTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACTCTGGGAAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCGGAAAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCTTTGGCTGAAGAAATGCAAGCTGTAAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTACTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCCCTTATATCATTGTATTCGGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGGCAGCAAATAATTCACATTCCAAAAGAGACGTGATTCGGTAG 4014 0.4943 MSLLSRFFYKRPPDGLLEFADRVYVFDSCFSTEALPEGMYQLYLRQILSDLHEDFPESSFLALNFRDGHTRSRFSRLLCDLDATVIDYPKQYEGCPLLPLALLHHFLRLCDTCLADPAAVVLFHCERGGWPLLAFLLAAFLVFRKAQSGERKILEMVHREAPKGLLQLLSALNPMPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPFFRIFGRNLLSKGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTSILDGEVKGGLPIEAFSRVQELFSGAEWIDSGDSAAVWLLKQLTVLNDPKEFSRFQGRGSWYSSPADSEEENNESSTADSSDEAFDVIPRSYADPSKLFASDTPDLVHLTFENNGGDYVNLTSTTPNQSLTDDVSLPLHALSKESSPCLSPPSPSHVPATQPLHIPAPLPPSSIPVQPSLAPPHPPPPPHPLVQNLNNASTLPSPPPPPTLPPIGRDANSSPGLPPHPLGSVQTSSAPLPPPPPPPLPPAPVPVQKNLVPPPPGPVQTGSAPPPPPPPPPPPPGLVQTGSVPPPPPPPPGPGPGPVRTGSAPPPPPPGLVQTGSVPPPPPPPPPPPFGPVRTGSAPPPPPPPPPPGPVQTGSAPPPPPPPPGPVRTGSAPPPPPPPPGPVRTGSTPPPPPPPPGPVRTGSAPPPPPPPPGSVRTGSAPPPPPPPPGSVRTGSAPPPPPPPPGPVRTGSAPPPPPPPPGPVRTGSAPPPPPPPPGAVRTGSAAPPPPPPPGPVRTGSAAPPPPPPPGPAQTGSAPPLAPKPPGAPPPPPGRGASPMPPPPPAATGSGVAPPPGKASTTNVGRAHGIGVTVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGPRAPEIDISELETLFSAASASDGSSAKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSVVLDIDQVENLIKFCPTKEEMEVLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKVNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELATSENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERAANNSHSKRDVIR* 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1312 1337 Coils Coil 1103 1123 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 404 431 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 548 562 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 978 997 - -
Pvu2g1312 1337 Pfam C2 domain of PTEN tumour-suppressor protein 197 335 IPR014020 -
Pvu2g1312 1337 Coils Coil 1299 1326 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 489 918 - -
Pvu2g1312 1337 ProSiteProfiles Formin homology-2 (FH2) domain profile. 924 1324 IPR015425 -
Pvu2g1312 1337 SUPERFAMILY Formin homology 2 domain (FH2 domain) 999 1327 - -
Pvu2g1312 1337 Gene3D Formin, FH2 domain 925 1310 IPR042201 -
Pvu2g1312 1337 SMART it6_source 529 1337 IPR015425 -
Pvu2g1312 1337 ProSiteProfiles C2 tensin-type domain profile. 198 337 IPR014020 -
Pvu2g1312 1337 Gene3D Protein tyrosine phosphatase superfamily 15 189 IPR029021 -
Pvu2g1312 1337 Coils Coil 1205 1232 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 498 540 - -
Pvu2g1312 1337 PANTHER FORMIN-J 840 1332 - -
Pvu2g1312 1337 PANTHER FORMIN-J 1 599 - -
Pvu2g1312 1337 Pfam Formin Homology 2 Domain 929 1299 IPR015425 -
Pvu2g1312 1337 Gene3D - 195 340 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 1303 1337 - -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 404 418 - -
Pvu2g1312 1337 SMART PTEN_C2_2 196 1036 IPR014020 -
Pvu2g1312 1337 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 337 IPR035892 -
Pvu2g1312 1337 MobiDBLite consensus disorder prediction 582 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1312 Pvu-Chr2 25646531 25657659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1312 1 469 FH2 protein (formin) Gene Family AT1G31810 68.790 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1312 - - var:108335629 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1312 2 25646531 25657659 Pvu2g1312 2 25646531 25657659 ECH