Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1305 GATCTCCAACATAATTTAAAGCATCAAAGAGTTTCAGAGTTAAACTTGCAGGGATACATTGGTAATCTATCTTATATGAGAAGCATCAACTTCTATGGTGAAATCCCACCAAAATTGGGGCGATTGTCACAACTGCATAACCTTTCTGTAGGAAATAATTCATTGGTTGGAGAAATCACTACAAACTTGACAGGTTGCACTAATCTCAAGTTTTTACATCTAGGTGGGAACAATTTTATTCACAAAATACCTATAGAAATTGGCTCACTTCGAAAGCTTCAACACTTGATCCTTTCAAATAACGAGTTTACTGGAGGAATCCCATCATTCATGGGAAATCTTTCATCTCTAACACTTCTTTCTGTAGAAGGAAACAACTTAGAGGGATCTATTCCACATGAAATATGTAGTCTCAAAAGCTTGACATGGATAGCATTTCACCTCAACAAACTGAGAGGCACATTTCCTACCTGTCTCTACAACATCTCATCTCTTAATATAATCTCAGCTACAAACAATCAACTTAATGGCTCTCTTCCCACCAACATCTTCCACACTCTCCCCAATCTTCACAAACTTCTAATTTCTAACAACCAAATCATAGGACAAGTTCCTAGTCTGAGCAAGTTACAGGATCTTCGATATCTATCTTTTTCTGGGAACAATCTAGGTGACAATTCTACTGATGATTTAGACATTTTAAAATCATTGACAAACTGTAGACAGTTGCAAATGATAGATATAGGCTTCAATAATTTTGGAGGTCATTTGCCAAATTCTTGGGGCAATTTATCTATGCAACTCAACGAACTATATCAGGGAGGCAATCATATAGTAGGAGAAATCCCTTCTGCGATAGGAAACCTCATTGGTTTAGTTCTCTTGTCCATGACTGGTAACTCCATAGATGGAACTATCCCTACAACTTTTGGTAAGCTTCAGAATATGCAAAAGTTGAGGTTAGGTAGAAACAAGTTATCAGGGGGAATAGGAGCCTTCATTGGGAACCTAAGAAACTGCCAAAGGTTGCAACACTTAGTACTTTCAAGAAACAACCTTACAGGAACCATTCCCGTAGAGCTTTTCAGTATTTCCTCTCTAACAACCTCCTTGGATTTATCACAAAACTTGTTGAATGGTAGCATACCAGTAGAAGTGGGAAACCTTAAAAACCTTGGTTACTTAGATATGTCTGAGAATAATCTGTCTTGGAATTCTTTAAATGGAATCATACCACCCTCTTTGGCATCACTCAAAGGACTTCGAAGTTTAGACCTCTCACAAAACAGCTTGGGTGGATCAATTCCTAATGATCTGCAGAAAATTTCTGTCTTACAATACTTCAATGTGTCTCTTAACATGTTGGTTGGTGAGGTACCGCAGGGAGGTGTCTTTCAAAATGCTAGTGCGTTAGTGGTCACTGGGAACAAAAATCTCTGTGGAGGTATTTCAGAACTGCATCTACCACCATGCCCTGTCGATGGTAAGAAACTTGCAAAACTTCATCCATTCATGTTGATAGCAACGATAGTTAGCGCAGTCGCTTTTCTTCTCATCATTGCAAGCCAGAAGAGAGTTGTTGCCATAAAAGTCTTGAACCTTCAAAAAAGAGGATCTCAAAAGAGTTTCATCGCTGAATGCAATGCACTAAAAAATATTAAACATCGAAATGTAGTTCCAATTTTAACATGCTGTTCTGGAATAGACTACAAATGTCAGGAATTTAAAGCTCTGATTTTTTACAATGTCCTTCTTGATGATGACATGATTGCTCAAGTCAGTGATTTTGGCCTAGTAAGGCTTTTCTCAACAATCAATGGTACCAGTTCTCAGCTCACAAGTACAATTGTCATAAAGGGTACTCTCGGCTATTATGGAATGGGTTCTGAGGTGTCTACAGATGGTGACATGTACAGTTTTGGGATTCTTCTTTTGGAGATGCTTAAAGGAAGAAGACCAATAGATGAAATATTTGAAGATGGTCAACATTTGCATACCTTTGTGGAAAGCTCACTTCCTGATAATCTTCTACAGGTTCTGGACCCATCCATTGTACTAAACCAAGAAGAAGAACAAAACAGTCAGAATCTTACTCCAACAGTTGAAAAGTGTATAGTTTCACTCTTTAAAATTGGACTTGTTTGTTCAATGGAATCTCCCAAAGAAAGAATGAAGGTTGATGTTACTAGGGAGGTAAGTGAAATCAGAAAAACTTTTCTTGCAATGTAA 2229 0.3777 DLQHNLKHQRVSELNLQGYIGNLSYMRSINFYGEIPPKLGRLSQLHNLSVGNNSLVGEITTNLTGCTNLKFLHLGGNNFIHKIPIEIGSLRKLQHLILSNNEFTGGIPSFMGNLSSLTLLSVEGNNLEGSIPHEICSLKSLTWIAFHLNKLRGTFPTCLYNISSLNIISATNNQLNGSLPTNIFHTLPNLHKLLISNNQIIGQVPSLSKLQDLRYLSFSGNNLGDNSTDDLDILKSLTNCRQLQMIDIGFNNFGGHLPNSWGNLSMQLNELYQGGNHIVGEIPSAIGNLIGLVLLSMTGNSIDGTIPTTFGKLQNMQKLRLGRNKLSGGIGAFIGNLRNCQRLQHLVLSRNNLTGTIPVELFSISSLTTSLDLSQNLLNGSIPVEVGNLKNLGYLDMSENNLSWNSLNGIIPPSLASLKGLRSLDLSQNSLGGSIPNDLQKISVLQYFNVSLNMLVGEVPQGGVFQNASALVVTGNKNLCGGISELHLPPCPVDGKKLAKLHPFMLIATIVSAVAFLLIIASQKRVVAIKVLNLQKRGSQKSFIAECNALKNIKHRNVVPILTCCSGIDYKCQEFKALIFYNVLLDDDMIAQVSDFGLVRLFSTINGTSSQLTSTIVIKGTLGYYGMGSEVSTDGDMYSFGILLLEMLKGRRPIDEIFEDGQHLHTFVESSLPDNLLQVLDPSIVLNQEEEQNSQNLTPTVEKCIVSLFKIGLVCSMESPKERMKVDVTREVSEIRKTFLAM* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1305 742 Pfam Leucine Rich Repeat 421 441 IPR001611 GO:0005515
Pvu2g1305 742 Gene3D Transferase(Phosphotransferase) domain 1 581 739 - -
Pvu2g1305 742 SUPERFAMILY L domain-like 236 481 - -
Pvu2g1305 742 PANTHER LRR RECEPTOR-LIKE KINASE 582 739 - -
Pvu2g1305 742 PANTHER LRR RECEPTOR-LIKE KINASE 194 338 - -
Pvu2g1305 742 PANTHER LRR RECEPTOR-LIKE KINASE 339 520 - -
Pvu2g1305 742 PANTHER LRR RECEPTOR-LIKE KINASE 10 199 - -
Pvu2g1305 742 PANTHER LRR RECEPTOR-LIKE KINASE 523 580 - -
Pvu2g1305 742 SUPERFAMILY Protein kinase-like (PK-like) 520 727 IPR011009 -
Pvu2g1305 742 Gene3D Phosphorylase Kinase; domain 1 513 579 - -
Pvu2g1305 742 Gene3D Ribonuclease Inhibitor 185 499 IPR032675 -
Pvu2g1305 742 Gene3D Ribonuclease Inhibitor 1 184 IPR032675 -
Pvu2g1305 742 PANTHER OS04G0122200 PROTEIN 194 338 - -
Pvu2g1305 742 PANTHER OS04G0122200 PROTEIN 10 199 - -
Pvu2g1305 742 PANTHER OS04G0122200 PROTEIN 582 739 - -
Pvu2g1305 742 PANTHER OS04G0122200 PROTEIN 339 520 - -
Pvu2g1305 742 PANTHER OS04G0122200 PROTEIN 523 580 - -
Pvu2g1305 742 Pfam Protein tyrosine and serine/threonine kinase 580 660 IPR001245 GO:0004672|GO:0006468
Pvu2g1305 742 SUPERFAMILY L domain-like 20 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1305 Pvu-Chr2 25527490 25530380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1305 7 741 Receptor kinase-like Gene Family AT5G20480 31.828 2.37e-109 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu2g1305 PK_Tyr_Ser-Thr 1.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1305 - - pvu:PHAVU_002G126600g 1460.28