Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1303 ATGTTCGGTGGCGGAGGGGAGGACGCGTTGGCGGCACGGCTTGGCATGGTCACGCCGTCGCTGCTGAACCCGGCGACGCCGTTGGTGATGTCCGGAGAGGTGTCGGCGGTGGTGAGGGAGGAGAGGGCACCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACGCGGGAGTTCATAGCGATACGCGCGGAGCTGGAGAGGGACTTCACTGCGTCGAAGCGGAACAAGACGCTTTGGGAAGTGGTGAGTTCGAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCTGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCAGAGCATAGCAGGCAATGTCCATTTTTTGAAGAATTGCATGCAGTCTTTACCCAAAGGGCACATAATATGCAACGATTACTTCTTGAATCTGAAACTCGCTCAGCTCAAACCAAGAAAGGAGTGAAAAGATCAAGTGGAGACCGATCTTCAGAGGAACTCTCAGAAGATGAAGACGAGGTTGAATATGACAGCGAAGAGGAAAAACCTTCTAGAAGCAATACCCGCAAAAAGAAAGTTGACAAAGTTGGAATAGATAAGTCTTCTTCAAGGGCCTACAATTCATCGCATGCTGTCAGTAGTAGTACTAGTAGTATTCAGGAAATGCTAAAGGAATTTTTCCAGCACCAGCTAAGGATGGAGATGAAGTGGAGGGAGATGATGGAGAGACGAGCTCATGAAAGACAGTTGTTTGAACAGGAATGGAGGCAGTCGATGGAGAAGCTTGAGCGGGAGAGATTAATTATTGAGCAGGCATGGAGGGAGAGAGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCGGAAAAAAGAGATGCTTTATTGACGACCCTTTTGAACAAACTCATTAATGAATCTACCTAA 930 0.4935 MFGGGGEDALAARLGMVTPSLLNPATPLVMSGEVSAVVREERAPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRSSGDRSSEELSEDEDEVEYDSEEEKPSRSNTRKKKVDKVGIDKSSSRAYNSSHAVSSSTSSIQEMLKEFFQHQLRMEMKWREMMERRAHERQLFEQEWRQSMEKLERERLIIEQAWREREEQRRMREESRAEKRDALLTTLLNKLINEST* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1303 309 Coils Coil 254 274 - -
Pvu2g1303 309 Gene3D - 49 110 - -
Pvu2g1303 309 Pfam Myb/SANT-like DNA-binding domain 47 130 IPR044822 -
Pvu2g1303 309 PANTHER - 38 307 - -
Pvu2g1303 309 ProSiteProfiles Myb-like domain profile. 49 105 IPR001005 -
Pvu2g1303 309 MobiDBLite consensus disorder prediction 144 217 - -
Pvu2g1303 309 PANTHER - 38 307 - -
Pvu2g1303 309 CDD GT1 47 112 - -
Pvu2g1303 309 SMART sant 45 107 IPR001005 -
Pvu2g1303 309 MobiDBLite consensus disorder prediction 203 217 - -
Pvu2g1303 309 MobiDBLite consensus disorder prediction 151 166 - -
Pvu2g1303 309 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1303 Pvu-Chr2 25499544 25501897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1303 47 309 Trihelix Transcription Factor Family AT2G38250 44.944 3.78e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu2g1303 Myb_DNA-bind_4 5.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1303 - - gmx:100812635 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1303 2 25499544 25501897 Pvu2g1303 2 25499544 25501897 ECH