Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1286 ATGAAGGAACCATCAAAGCCATGGAGACCCATCACTGCAAATTGCTGCTCCACAGAGGACCAAACTATTTTCAAGAACTTCAGCAGGTGCAAGCCTTCACGCTCTGAGTTGTCAAAGAACATTGCTCCTTTGCCATCGTTCAGGAGGCTCTCCTTCTCCGATCTCAGCCGTTCTTCATCTGTGCGAATCAATGAGGATCTTGCACAGTCTTTTGGGTCGGACTTGTTTGATTTTCAGCTGAGTGAGTTGCGTGCCATAACGCAGAATTTCAGCAGCAACTTCTTGCTGGGAGAAGGAGGGTTTGGAACTGTGCATAAGGGCTACTTAGATGATCATCTCAGACTCGGATTGAAAGCACAACCTGTTGCTGTCAAGCTTCTTGACATCGAAGGCTTGCAAGGACACCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGTTAAGACACCCCAATTTGGTTAAATTGATTGGGTATTGTTGTGAAGATGAAGAACGATTACTTGTCTATGAATTCATGCCACGAGGAAGTTTGGAGAATCATCTCTTCAGAAGGCTAACATCACTTCCATGGGGAACAAGATTAAAAATTGCAATAGGTGCTGCTAAAGGACTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTATAGAGACTTCAAGACTTCCAATGTTTTGCTTGATTCAGAGTTCACAGCTAAATTGTCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAACACACATGTTTCAACCAGAGTCATGGGCACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGGCATTTAACCACCAAAAGCGATGTCTACAGCTTTGGGGTAGTCCTGCTAGAACTGCTGACGGGAAGGAGAGCAACGGACAAAACAAGACCAAAGACTGAGCAAAACCTTGTGGATTGGTCAAAACCTTACTTGAGTAGCAGTAGGAGATTGAGGTATATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTGCAAAGGAAATTTCTCGTTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGCCGATGATTGTTGAAACTCTTGAAGGCTTGCAACAGTACAAGGACATGGCTGTTACCAGTGGACACTGGCCAGTGTCACAAAAATCTACTAGAAGTAAAGTCTCCAACAATAAGATGAATGTGAACACTAGAGCCGGTGCAAACCACAAGCAACCATCACCAGTTCTGAGCAAAAAAACTTGA 1260 0.4405 MKEPSKPWRPITANCCSTEDQTIFKNFSRCKPSRSELSKNIAPLPSFRRLSFSDLSRSSSVRINEDLAQSFGSDLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYLDDHLRLGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWGTRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSEFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNLVDWSKPYLSSSRRLRYIMDPRLAGQYSVKGAKEISRLALQCISLNPKDRPRMPMIVETLEGLQQYKDMAVTSGHWPVSQKSTRSKVSNNKMNVNTRAGANHKQPSPVLSKKT* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1286 419 PANTHER SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED 29 405 - -
Pvu2g1286 419 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Pvu2g1286 419 PANTHER OS01G0588500 PROTEIN-RELATED 29 405 - -
Pvu2g1286 419 Pfam Protein tyrosine and serine/threonine kinase 96 366 IPR001245 GO:0004672|GO:0006468
Pvu2g1286 419 Gene3D Phosphorylase Kinase; domain 1 53 172 - -
Pvu2g1286 419 SUPERFAMILY Protein kinase-like (PK-like) 73 369 IPR011009 -
Pvu2g1286 419 MobiDBLite consensus disorder prediction 381 419 - -
Pvu2g1286 419 Gene3D Transferase(Phosphotransferase) domain 1 173 388 - -
Pvu2g1286 419 ProSiteProfiles Protein kinase domain profile. 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1286 419 CDD STKc_IRAK 96 369 - -
Pvu2g1286 419 MobiDBLite consensus disorder prediction 380 419 - -
Pvu2g1286 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1286 Pvu-Chr2 25091565 25095566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1286 78 382 Glycoside Hydrolase AT3G07070 52.104 1.45e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu2g1286 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1286 - - gmx:100814241 782.326