Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1278 ATGGAGGGTGGGAGAATAAGACAGTGGTTGAACCTTCTGGTGTGTGCACTGCTGTCGCTGATGGCAGAGGCTTCTTATGTGCCAATCACCTATCTTCAGAACGCGGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGGTTACCATTTTGACAGGGGATCTGGAACAGGGATTAACAATTGGTTGGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTCTCTCGCAAGACCAATCATTTAGGTTCATCTAAGCAAATGGCAAAGCAAATTGCCTTTTCGGGAATTATGAGTAACAGGCCAATGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGCGATGGTTCATCTTTTACTGGTGATGTAGAAGCAGTCAATCCAGTTACTAAGTTGCACTTTAGGGGAGCAAGGATTTTTGCTGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATTTCTGGATGTTCAGCTGGAGGATTAACTGCAGTACTGCATTGTGATCGCTTCAAAGCTCTATTACCTAGAGAAGCGAGAGTGAAATGCGTCTCAGATGCTGGTTATTTTATCAATGCAAGGGATGTCACCGGGGCATACCACATTCAACAGTACTTCAGTCAAGTTGTTGCTACACATGGCTCGGCAAGGAATTTGCCTCAGTCATGCACTTCAAGACTTACCCCAAAGCTGTGCTTTTTCCCACAATATTTGGTGTCACATATCACTACGCCAATCTTCTTTGTAAACGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCACTGGCATAGCTGTAAGCTTGATATAAACAACTGCTCACCTGATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCGTTGACTGTGCTTGGCAACTCTTCATATAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTGAGAAATGACTCTCCAGAGCTGGAAAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGACTTTCCACCAGATAGATTGTCCTTACCCCTGCAACCCCACTTGTCACAACCGCGTTTTGGAACCACAAGACAATCACCAAGGAGTATAG 1203 0.4431 MEGGRIRQWLNLLVCALLSLMAEASYVPITYLQNAVAKGAVCLDGSPPGYHFDRGSGTGINNWLVAFEGGGWCNNVTTCLSRKTNHLGSSKQMAKQIAFSGIMSNRPMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVMEDLLAKGMKNARNAIISGCSAGGLTAVLHCDRFKALLPREARVKCVSDAGYFINARDVTGAYHIQQYFSQVVATHGSARNLPQSCTSRLTPKLCFFPQYLVSHITTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLDLMQGFRTEFLRALTVLGNSSYKGMFIDSCYAHCQTEMQETWLRNDSPELEKTTIAKAVADWFYERRTFHQIDCPYPCNPTCHNRVLEPQDNHQGV* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1278 400 SUPERFAMILY alpha/beta-Hydrolases 143 272 IPR029058 -
Pvu2g1278 400 PANTHER NOTUM-RELATED 4 394 IPR004963 GO:0016787
Pvu2g1278 400 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
Pvu2g1278 400 PANTHER PECTIN ACETYLESTERASE 4 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1278 Pvu-Chr2 24997760 25002036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1278 5 395 Carbohydrate Esterase AT4G19420 60.798 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1278 K19882 - gmx:100818146 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1278 2 24997760 25002036 Pvu2g1278 2 24997760 25002036 ECH
Pvu2g1278 2 24997760 25002036 Pvu3g2856 3 50294983 50299396 PCT
Pvu3g2855 3 50280819 50285824 Pvu2g1278 2 24997760 25002036 PCT