Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1274 ATGAACCAAATGAACACTTTTGTTCTCCTGTTTCCTTCCTTTTGTTCTGTAGCATGTCTTCCCATGCTTGTCCTCTTTATTATCAACTCTCTCTTGTGTGTCCCAAGCACAGCTGCCTCCATATTAGGAAACCAGACCGACCATTTGGTGTTGCTCAAATTTAAGGATTCAATATCAAATGACCCTTATAAAATCATTGCATCTTGGAATAGTTCCATCCATTTTTGCAAGTGGCCTGGAGTTACATGCAATTCCACGAATCAAAGAGTTATAGAGTTAAACCTAGAAGGAAAACAGTTGCAAGGTCTCATACCACCCCATATAGGCAATCTCTCTTTCCTAACCAGGCTTAACCTTGGAAACAACAGCTTTTATGGAAAAATTCCACAAGAACTGGGTCGGTTGTTACAGTTACAAAACTTATCGCTCACCAATAACTCTTTGAATGGAGAAATACCTACAAACTTGACAAGATGTTCTAAGCTTAGAGAGTTACACTTGTTTGGTAACAATTTGATTGGTAAAATACCAATGGAAATTGGCTACCTGCAAAGGCTTCAAGAATTGACCTTGGCAGTAAACAATCTAACAGGAGCAATCCCATCTTCCATAGGGAATCTTTCATCTCTCGTTTCTCTCTCAATCGGTGTCAATTACTTGGAGGGAAATATTCCACAAGAAATTTGTCTCCTCCAAAACTTGTCATTGATGTCATTGCATGTCAACAAGCTGATAGGTACATTTCCTTCTTGTCTTTTCAATATGTCATCTCTTACCATTATCTCAGCTGCAGACAATCAATTTAGTGGCTCCCTTCCACCAAACATGTTCCACACCCTCCCTAATCTCCGAGAATTCCTTGTTGGTGGGAATCATATCTCAAGTTCAATCCCAACTTCCATTGCAAATGCATCTGTCCTCCAAACACTTGATGTTGGTACAAATCATTTAGTGGGCCAAATTCCTAGTCTAGGAAAGCTGAAAAAGCTTTGGTTCCTTAGTCTGTACAGCAACAACTTAGGTGACAATACGACGAAGGACTTGGAGTTTTTAAAATCCTTAGCCAATTGTAGCGAGTTGGAAGTGGTTTCTATTTCCTATAATAATTTTGGAGGTAGTTTGCCAAGTTTTATGGGAAATTTATCCACCAAGCTTAGTCAATTATATCTTGGGGGTAATCACATATCAGGAAAAATTCCTCCAGAATTAGGCAATCTAGTTAACTTAACTATCTTGACAATGGAAATTAACCACTTTGAAGGGATTGTTCCAGCCACTTTTGGGAAGTTCCAGAAGCTACAAAAGTTGGAGATGAGTAGAAACAAGTTGACAGGAGACATTCCAGATTTTATTGGCAACCTCACTCAGTTGTATTATTTGGGCATGGCAGAAAACATGTTAGAAGGAAAGATTCCTCCAAGTATAGGAAACTGTAAAAATTTACAATACCTTAACCTTTGGAAAAACAACCTTGGAGGAAGCATACCCTTAGAGGTTTTTAGTCTTTTCTCTTTAACAAACTTACTGGATTTGTCACAAAATTCACTGAGTGGCAGGCTTCCTGTTGAAGTTGGCCGCTTAAAAAATCTCGGGAAGATGAGTGTGGCTGAAAATAATTTGTCTGGTGAAATTCCTGAAACCATTGGAGACTGCATAAGCTTGGAGTACCTTTGTCTGCAAGGAAATTCCTTTCATGGAGCCATACCTTCCTCTTTGGCTTCACTCAAAGGTCTTCGAGTATTAGACATGTCACGAAATCTTCTGACTGGATCAATTCCTAAGGATCTACAAAAATTTTCTTTCTTAGAATACTTCAATGTATCTTTTAACATGTTGGAGGGTGAAGTACCACTGGAAGGTGTCTTTCAAAATGCAAGTGAGTTAACCGTGGTTGGGAACAATAAGCTTTGTGGGGGTGTTTCACAGTTGCATCTAGCACCGTGTCCTGTCAAAAGTAAGAAACCTGAAAAACACTTGAATTTTGTTTGGATCGTAGTGATGATAGTTAGTGCGGTTTTTTTTCTTCTCGTTCTGCCATTTTTCATATCTATCTACCGGGTGAGGATAAGAAACCACAAAAAACCATCGTCTGATTTGCCAACAATTGACCAAATGCAAAAGGTTTCATACCAAAACCTACATCAAGGAACCGATGGGTTTTCAGTAAAAAACTTGATAGGATCTGGAAATTTTGGATCCGTCTACAAAGGGACTATTGAGATAGAAGGAGACAAAAATGTTGTTGCCATAAAGGTTGTAAAGCTTCAACAGAAGGGAGCTTCAAAGAGTTTCATTGCTGAATGTAATGCCTTGAAAAGTATTAGGCATCGAAACTTGGTCAAAACTTTAACGTGTTGTTCTAGCATAGATCACAGAGGCCAAGACTTCAAAGCTCTTGTTTTTGAGTACATGACAAATGGAAGTCTAGAAAGATGGTTGCATCCAGAAATAGAAGTTGCAAAGCAGCCTGCTAGATCATTGAACCTTGACCAAAGATTAAGTATTATCATTGATGTTGCTTCTGCTTTTCACTATCTTCATTACGAATGTGGGCAAGCCATTATTCACTGTGATTTGAAGCCAAATAATGTTCTTCTCGATGATTGCTTGGTAGCTCATGTAAGCGACTTTGGTTTAGCTAGAAGACTCACAACTTTTGCAGTTTCTCCAAAACAAACTAGCACTATTGAAATAAAGGGCACAATTGGTTATGCTCCTCCAGAATATGGAATGGGATCAAAGGTGTCTATAGAAGGCGACGTGTACAGCTTTGGAATTCTTGTTTTGGAAATGTTAACTGGGAGAAGACCAATAGATGAAATGTTTGAAGATGGTCTTAATCTCCATAACTACGTCAAAATTTCAATTCCAAACCACCTTCCCCAGATTGTGGACCCAACTATTCTTCCAATGGGATTAAAGGTGGCTGCTAATAACCAAAATCTTCCCCCAATGCATCCTATAGTAGAGAAATGCTTACTATCACTTTTTAGGATTGCACTTGCTTGTTCAAGGGAGTCGCCAAAAGAAAGAATGAGCATGGTTGATGTAATTAGCGAGCTCCATTTGATCAAAAGTTCCTTTTCATCATGA 3093 0.3873 MNQMNTFVLLFPSFCSVACLPMLVLFIINSLLCVPSTAASILGNQTDHLVLLKFKDSISNDPYKIIASWNSSIHFCKWPGVTCNSTNQRVIELNLEGKQLQGLIPPHIGNLSFLTRLNLGNNSFYGKIPQELGRLLQLQNLSLTNNSLNGEIPTNLTRCSKLRELHLFGNNLIGKIPMEIGYLQRLQELTLAVNNLTGAIPSSIGNLSSLVSLSIGVNYLEGNIPQEICLLQNLSLMSLHVNKLIGTFPSCLFNMSSLTIISAADNQFSGSLPPNMFHTLPNLREFLVGGNHISSSIPTSIANASVLQTLDVGTNHLVGQIPSLGKLKKLWFLSLYSNNLGDNTTKDLEFLKSLANCSELEVVSISYNNFGGSLPSFMGNLSTKLSQLYLGGNHISGKIPPELGNLVNLTILTMEINHFEGIVPATFGKFQKLQKLEMSRNKLTGDIPDFIGNLTQLYYLGMAENMLEGKIPPSIGNCKNLQYLNLWKNNLGGSIPLEVFSLFSLTNLLDLSQNSLSGRLPVEVGRLKNLGKMSVAENNLSGEIPETIGDCISLEYLCLQGNSFHGAIPSSLASLKGLRVLDMSRNLLTGSIPKDLQKFSFLEYFNVSFNMLEGEVPLEGVFQNASELTVVGNNKLCGGVSQLHLAPCPVKSKKPEKHLNFVWIVVMIVSAVFFLLVLPFFISIYRVRIRNHKKPSSDLPTIDQMQKVSYQNLHQGTDGFSVKNLIGSGNFGSVYKGTIEIEGDKNVVAIKVVKLQQKGASKSFIAECNALKSIRHRNLVKTLTCCSSIDHRGQDFKALVFEYMTNGSLERWLHPEIEVAKQPARSLNLDQRLSIIIDVASAFHYLHYECGQAIIHCDLKPNNVLLDDCLVAHVSDFGLARRLTTFAVSPKQTSTIEIKGTIGYAPPEYGMGSKVSIEGDVYSFGILVLEMLTGRRPIDEMFEDGLNLHNYVKISIPNHLPQIVDPTILPMGLKVAANNQNLPPMHPIVEKCLLSLFRIALACSRESPKERMSMVDVISELHLIKSSFSS* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1274 1030 Gene3D Ribonuclease Inhibitor 169 275 IPR032675 -
Pvu2g1274 1030 SMART serkin_6 720 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1274 1030 PANTHER OS04G0122200 PROTEIN 32 1029 - -
Pvu2g1274 1030 Gene3D Ribonuclease Inhibitor 347 657 IPR032675 -
Pvu2g1274 1030 SUPERFAMILY L domain-like 45 340 - -
Pvu2g1274 1030 SMART LRR_typ_2 255 279 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 280 304 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 135 159 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 430 454 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 183 207 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 527 551 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 575 598 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 406 429 IPR003591 -
Pvu2g1274 1030 SMART LRR_typ_2 478 502 IPR003591 -
Pvu2g1274 1030 Pfam Protein tyrosine and serine/threonine kinase 722 943 IPR001245 GO:0004672|GO:0006468
Pvu2g1274 1030 ProSitePatterns Protein kinases ATP-binding region signature. 726 751 IPR017441 GO:0005524
Pvu2g1274 1030 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515
Pvu2g1274 1030 Gene3D Ribonuclease Inhibitor 47 161 IPR032675 -
Pvu2g1274 1030 SUPERFAMILY Protein kinase-like (PK-like) 693 1023 IPR011009 -
Pvu2g1274 1030 Gene3D Phosphorylase Kinase; domain 1 701 803 - -
Pvu2g1274 1030 SUPERFAMILY L domain-like 383 638 - -
Pvu2g1274 1030 Gene3D Transferase(Phosphotransferase) domain 1 804 1029 - -
Pvu2g1274 1030 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Pvu2g1274 1030 Gene3D Ribonuclease Inhibitor 276 346 IPR032675 -
Pvu2g1274 1030 PANTHER LRR RECEPTOR-LIKE KINASE 32 1029 - -
Pvu2g1274 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 854 866 IPR008271 GO:0004672|GO:0006468
Pvu2g1274 1030 ProSiteProfiles Protein kinase domain profile. 720 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1274 Pvu-Chr2 24944250 24947606 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1274 44 1028 Receptor kinase-like Gene Family AT3G47570 46.586 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu2g1274 PK_Tyr_Ser-Thr 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1274 - - gmx:100786600 1636.7