Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1271 ATGAAGCATTTTTCTCTTCTGTTACTTGGATTTGGATCTATATGTGTTCAACTGTTTTCTCTCTTTACATTAAGCTCACTAAGTGTAGCCTTTGCATTAGGAAATGAGACTGATCATTTGGCACTTCTCCAATTCAAGAAATCTATAACTAGGGACCCATATGGAGTCTTACTTTCTTGGAATACTTCAACTCACTTCTGTAACTGGCCTGGAATAACATGCAATCTCAAGCTTCAAAGAGTTACACAGTTAGTCTTGTTAAGGTATATGTTGGGGGGATCCATATCTCCCCACATAGGAAATCTCTCTTATATGATCAACTTCAATCTAGCAATCAACAACATCCATGGAGAAATACCACAGGAACTGGGACGGTTGTCACGTCTGCAACAACTATCTGTCTCAAACAACTTATTGGTAGGAGAAATTCCTACAAACTTGACGGGATGTACTCATCTCAGATTCTTATACTTACAAAGGAACAATCTAACAGGCAAAATACCAATCGAAGTTGGCTCACTTGCAAAGCTTGAAAGCTTGGGAGTTTCTACTAACAAGTTAACAGGAGAAATCCCTTCATTCATAGGTAACCTTACATCCCTCACTGTTCTCGGTGTCGGTAGTAACAACTTTGAAGGACATATACCACAGGAAATATGCCGGCTCAAAAACTTGACATTTGCAGCATTTGGTGTCAACAAGTTCACCGGAACACTTCCTTCTTGTCTTTACAATATGTCATCTCTCACCATGATTTCAGTTACAGAAAATCAATTAACTGGCCATCTTCCACCTAACATGTTCCACACACTCCCCAATCTCCAAGAACTTTACATTGGTGGCAATCAAATCTCTGGTCCAATCCCACCTTCCATCACAAATGCAACTATTTACTTCTTAGCATTGGAGGCCAGTCGAAACAGTCTCACGGGACAAATTCCAAGCATGGGAAATTTCCAGTATCTTGATGTCCTATCTCTGTCTTGGAACCATCTAGGTGACAATTCAACTAATGATTTCGATTTTCTAGATTCATTGGCTAACTGTAGTAGGTTGCAACTGTTTTCCATATCCTACAATAATTTTGGAGGTCATTTGCCAGATTCTGTGGGAAATTTATCCTCCAAACTTAGTCAATTATATCTTGGAGGTAATCAGATATCAGGGAGAATCCCTGCAACAATAGGAAATTTAGTTAACTTAACTCTCTTGACTATGGAAAACAACAGCCTTGGTGGGAATATCCCAACAACTTTTGGGAAGTTTCAAAGATTGCAGAAGTTAAATTTGGGTGCAAACAAGCTGTCAGGAGAGTTAAGAACCATAGGCAACCTTACTCAATTGTTTCATTTGGAATTAGCATATAATTTGTTTGAAGGGAATATTCCTCAAAGTATAGGAAACTGCCAGAGGTTACAGTACTTGGACCTTTCACATAACAACTTTACAGGAACCATACCCTCGGACCTTTTTAAGCTTTCATCTCTAACAAAATTGTTGGATTTGTCACTAAACTCATTGAGTGGCAGTGTACCTGAAGAAGTAGGTAGCCTAAAAAATCTTGGTTCGCTAGATATGTCTGAGAATCAGATGTCCGGGGAAATTCCTCCAACAATGGGAGAATGCATAATGTTGGAATACCTGTATTTACAAGGGAATTCTTTACAAGGAATCATTCCATCATCTTTGGCATCACTCAAAGGGCTTCTACGTTTAGACCTGTCACGAAATCAATTGTCTGGATCAATTCCTAATACTCTACAAAGCATTTCTTCCTTACAGTATTTCAATGTATCCTTTAACAAATTGGAGGGTGAAGTACCAACCTTTGGAAATGCAAGTGCGATATTGGTTATGGGAAACAATAAACTTTGTGGGGGAACTTCAGAGCTGCATCTACCAACGTGCCCCGTCAAAGGTAAGAAACTTGCAAAACACCACAAGTTCAGGTTGATAGCAGTGATAGTTAGTGTGATTACTTTTCTTCTCATATTGTCAATTACTCTAACTATTTACTGGACAAGGAAAAGGAGTAAGAAAACATCTTTGGATTCACCAGCAAATGATGATCAGTCGGCTACAGTTTCGTACCAAAGCCTGCACAATGGAACTGATGGGTTCTTAGCAACAAACTTGATAGGGTCTGGAAATTTTAGCTCTGTTTACAAGGGAACTCTTGAGGAGTTAGATGAAAAAGTTGTTGCCATAAAGGTCCTAAACCTTCAGAAAAAGGGAGCTCATAAGAGTTTTATTTCAGAATGCAACGCACTTAGAAATATCAAACATCGAAATCTGATTCAGGTTTTGACATGTTGTTCCAGCATAGATTACAAAGGTCAAGAATTCAAAGCTCTAATTTTTCCCTACATGACAAATGGAAGCTTAGAGCAATGGCTGCATCCTAAGACACTAAGCGAAGAGGATCCGAGAAAATTGAGCCTTGATCAAAGATTAAATATCATGGTCGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAACCAATAATTCATTGTGATTTAAAGCCAAGTAATGTCCTTCTCGACAATGAGATGGTTGCTCATGTGAGTGATTTTGGCATATCAAAACTTCTCTCAGCCATCAATGACAACACTTCTAAACAAACAAGCACAATTGGAATAAAGGGTACTCTTGGCTATGTTCCTCCAGAGTATGGAGTGACTTCTGAAGTATCAACATACGGTGACATATACAGCTTTGGGATTCTTATGTTGGAAATGCTTACAGGAAAAAGTCCCACAGATGAAAGCTTTGAAGATGGTCAAAATCTTCATAACTTTGTTCTAACTTCATTTTCTGATAATCTTTTGCAAATTTTGGATCCACTACTTATTCCAACAGATGAATCACCACCATTGAAAGGAAACAATTGGAATCTTGATCCAAATGTTGAGATGTGCTCAGTGTCCCTTTTTAGGATTGGACTTGCTTGTTCTATGAAATCACCAAAAGATAGAATGAATATTGCTCATGTCACTAGGGAGCTTAACAGAATCAGAGAGGTCTTTCTTGTTGGTGTGGATGATTCAAAATAA 3066 0.3836 MKHFSLLLLGFGSICVQLFSLFTLSSLSVAFALGNETDHLALLQFKKSITRDPYGVLLSWNTSTHFCNWPGITCNLKLQRVTQLVLLRYMLGGSISPHIGNLSYMINFNLAINNIHGEIPQELGRLSRLQQLSVSNNLLVGEIPTNLTGCTHLRFLYLQRNNLTGKIPIEVGSLAKLESLGVSTNKLTGEIPSFIGNLTSLTVLGVGSNNFEGHIPQEICRLKNLTFAAFGVNKFTGTLPSCLYNMSSLTMISVTENQLTGHLPPNMFHTLPNLQELYIGGNQISGPIPPSITNATIYFLALEASRNSLTGQIPSMGNFQYLDVLSLSWNHLGDNSTNDFDFLDSLANCSRLQLFSISYNNFGGHLPDSVGNLSSKLSQLYLGGNQISGRIPATIGNLVNLTLLTMENNSLGGNIPTTFGKFQRLQKLNLGANKLSGELRTIGNLTQLFHLELAYNLFEGNIPQSIGNCQRLQYLDLSHNNFTGTIPSDLFKLSSLTKLLDLSLNSLSGSVPEEVGSLKNLGSLDMSENQMSGEIPPTMGECIMLEYLYLQGNSLQGIIPSSLASLKGLLRLDLSRNQLSGSIPNTLQSISSLQYFNVSFNKLEGEVPTFGNASAILVMGNNKLCGGTSELHLPTCPVKGKKLAKHHKFRLIAVIVSVITFLLILSITLTIYWTRKRSKKTSLDSPANDDQSATVSYQSLHNGTDGFLATNLIGSGNFSSVYKGTLEELDEKVVAIKVLNLQKKGAHKSFISECNALRNIKHRNLIQVLTCCSSIDYKGQEFKALIFPYMTNGSLEQWLHPKTLSEEDPRKLSLDQRLNIMVDVASALHYLHHECEQPIIHCDLKPSNVLLDNEMVAHVSDFGISKLLSAINDNTSKQTSTIGIKGTLGYVPPEYGVTSEVSTYGDIYSFGILMLEMLTGKSPTDESFEDGQNLHNFVLTSFSDNLLQILDPLLIPTDESPPLKGNNWNLDPNVEMCSVSLFRIGLACSMKSPKDRMNIAHVTRELNRIREVFLVGVDDSK* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1271 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Pvu2g1271 1021 SMART serkin_6 707 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1271 1021 SUPERFAMILY Protein kinase-like (PK-like) 685 1006 IPR011009 -
Pvu2g1271 1021 ProSitePatterns Protein kinases ATP-binding region signature. 713 737 IPR017441 GO:0005524
Pvu2g1271 1021 Gene3D Ribonuclease Inhibitor 337 637 IPR032675 -
Pvu2g1271 1021 SMART LRR_typ_2 566 589 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 445 469 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 198 222 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 470 493 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 271 295 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 126 150 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 398 421 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 246 270 IPR003591 -
Pvu2g1271 1021 SMART LRR_typ_2 518 542 IPR003591 -
Pvu2g1271 1021 Pfam Protein kinase domain 711 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1271 1021 PANTHER OS04G0122200 PROTEIN 23 1015 - -
Pvu2g1271 1021 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Pvu2g1271 1021 PANTHER LRR RECEPTOR-LIKE KINASE 23 1015 - -
Pvu2g1271 1021 Gene3D Transferase(Phosphotransferase) domain 1 790 1014 - -
Pvu2g1271 1021 ProSiteProfiles Protein kinase domain profile. 707 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1271 1021 SUPERFAMILY L domain-like 378 625 - -
Pvu2g1271 1021 Gene3D Ribonuclease Inhibitor 231 334 IPR032675 -
Pvu2g1271 1021 Gene3D Ribonuclease Inhibitor 149 228 IPR032675 -
Pvu2g1271 1021 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Pvu2g1271 1021 Gene3D Phosphorylase Kinase; domain 1 687 789 - -
Pvu2g1271 1021 Pfam Leucine rich repeat 471 530 IPR001611 GO:0005515
Pvu2g1271 1021 Pfam Leucine rich repeat 545 603 IPR001611 GO:0005515
Pvu2g1271 1021 Pfam Leucine rich repeat 233 284 IPR001611 GO:0005515
Pvu2g1271 1021 SUPERFAMILY L domain-like 36 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1271 Pvu-Chr2 24906233 24909872 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1271 35 1014 Receptor kinase-like Gene Family AT3G47570 44.668 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu2g1271 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1271 - - gmx:102664380 1509.58