Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1251 ATGCCACAGAACTGCATAGCACCAAAACCAGAATACTGTAATAGTCATCACTCTGTAGAAGGTCCCCAAGAGATGACTGAGCCCCATAACTCAACTGTCCTTTCTCATCCCATGCAAACCAATGAACAACAACAACCTTTTCCAAAACTCATTATGTACCCAATAACTCTGAAGTTTGAGGAACTGGTGTACAAAGTTAAACTAGAGCAGAAAGGAGGATGCTGGGGCAGTACATGGACTTGCAAGGAGAAGACCATACTGAATGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCCATGTTGGGGCCATCAGGCAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGCCGGCTCAGCGGCAAACTATCTGGTAAGATCACGTACAACGGCCAACCTTTCTCTGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCACCTAACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTAAGGCTTCCCAACAGCTTGACCAGAGATGAAAAAGTTCAACATGTAGAGAGAGTGATCACTGAGCTAGGACTGACTCGTTGCAGGAGCAGCATGATAGGTGGCCCACTTTTTAGGGGAATATCAGGTGGAGAAAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAACCCAAGCCTTCTGTTGCTGGATGAGCCTACTTCAGGCTTGGATTCCACCACAGCACAAAGAATCCTCAACACAATCAAGCGCCTAGCTAGTGGGGGTAGAACTGTTGTCACCACTATTCACCAGCCCTCTAGTAGGCTCTACTATATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGCTGCCCCATCTATTATGGTGCTGCTTCAACTGCCTTGGACTACTTCTCTTCTGTTGGTTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCAGACTCCAAGCAAGCAGCTGAACAAAATGAAGGACTGGAACAAGAGAGGAAACAGGTGAGGGAATCTCTCATCTCTGCTTATGAGAAGAATATAGCTACGAGTCTGAAAGCTGAGGTTTGTAGCCTGGAAGTGAACAACCACAATATCACAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGAACAATGGAGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTACAAAGGGGAGTGAAGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTTGTAAGTGTCGCTTTTCTTGGTGGACTATTGTGGTGGCATACTCCGGAGTCACACATTGAAGATCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTCCCTCAAGAGAGGAGGATGCTGATCAAGGAACGGTCGTCAGGAATGTACCGCCTTTCTTCCTACTTCCTTGCCAGAACAATAGGAGACTTGCCACTGGAGCTTGCACTTCCAACTGCATTTGTTTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCTCTTCTTGTGGTTCTCTACAGTGTTGTTGTCTCTCAAAGCCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGGTACTACATACAACAGATTCCTCCATTCATTGTGTGGCTCAAGTACTTGAGCTACAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTACTATGAATGTTCAAAGGGGGAGCTGTGCAAAGTGGCAGATTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTTCATTATGGCCCTGATGTTGGTGGGTTATCGACTCGTTGCTTATTTTGCACTGCATAGAGTTAGGTAG 1977 0.4537 MPQNCIAPKPEYCNSHHSVEGPQEMTEPHNSTVLSHPMQTNEQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGAASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKQAAEQNEGLEQERKQVRESLISAYEKNIATSLKAEVCSLEVNNHNITKDACARNSIKPEQWSTSWWHQFKVLLQRGVKERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKVADFPPIKSMGLNHLWVDVFIMALMLVGYRLVAYFALHRVR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1251 658 Pfam ABC-2 type transporter 397 602 IPR013525 GO:0016020|GO:0140359
Pvu2g1251 658 Coils Coil 328 355 - -
Pvu2g1251 658 CDD ABCG_EPDR 54 291 - -
Pvu2g1251 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
Pvu2g1251 658 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 45 656 - -
Pvu2g1251 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 45 656 - -
Pvu2g1251 658 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524
Pvu2g1251 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 301 IPR027417 -
Pvu2g1251 658 Pfam ABC transporter 88 237 IPR003439 GO:0005524
Pvu2g1251 658 SMART AAA_5 96 286 IPR003593 -
Pvu2g1251 658 Pfam ABC-2 type transporter 266 364 IPR043926 GO:0140359
Pvu2g1251 658 Gene3D - 76 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1251 Pvu-Chr2 24571337 24574591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1251 86 285 Calmodulin-binding Proteins AT2G36910 30.332 1.90e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1251 K05681 - gmx:100780191 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1251 2 24571337 24574591 Pvu3g2869 3 50429905 50433359 PCT