Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1249 ATGGCAGAAAGTTTAGAATCAATGGGAGTAGTACCAGTGAGGGGTGGATCGTGGAAAGCTCATATGGGCATGTTACTGTCGCAGGCATTCTACGGTGGCTACCATGTAATCACCAAAGTGGCCCTTAATGTTGGGGTGAACCAACTAGTTTTCTGCTTCTACAGGGATCTTCTTGCCTTCACTATTCTCGCTCCTCTCGCTTTTTTTCTTGAAAGACGGACTAGACCGCCCATCACAAAGAAGCTATTGATGTCATTCTTCTTTCTTGGATTGACCGGGGTATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAACCATTCCAGTCTTTACATTTATGTTTACTTTGATGATGGGCATAGAAAGACTGAACTTGTTCAGCTATGAAGGTTTGGCAAAGGCTGGAGGAACTCTTATCTGTGTTTCAGGTGCCATATTTATGGTTTTCTATCGTGGTCCAGCTGTTATAGGGGATAACGAAATGGATCAAGTTGCACAAATTAAACTAAGTGTCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATCAACAGCTTACTTGATATTGGACTTGACAGCTTTCAGCTTGGGGTTGTGTTCTTGATAGGGAACTGCATCTGTATGGCTGCTTTTCTAGCCATTCAGGCACCAGTATTGAAAAAGTATCCTGCAAATCTATCTGTCACCGCATATTCATTCGTCTTTGGAGTTGCACTGATGGTGATTGCATCATATTTCATGGTTAATGAGTCGACTGAGTGGATTTTGACACAATCAGAGATACTAGCTGTTGCATATGCCGGAACTATTGCATCTGCTCTTAACTATGGAATCATTACATGGAGTAATAAGATCTTGGGGCCAACTTTGGTTTCCCTTTACAATCCGCTTCAACCTGCATTTTCTGCCTTCCTTTCCCAAATTTTCCTTGGCACTCCAATTTACCTGGGAAGCATCCTAGGGGGATCTTTCATCATTGCCGGTCTATATATAGTTACTTGGGCATCTTATAGAGAAATACAAGAAACTTCTGGAGTTACTCCTAATGGTTCTTGGATCTCTGAACCACTTATTCATGAAAAAAATGAATACCATAGTGGTCGCATTCAGGGTGCTCTGGCGTAG 1161 0.422 MAESLESMGVVPVRGGSWKAHMGMLLSQAFYGGYHVITKVALNVGVNQLVFCFYRDLLAFTILAPLAFFLERRTRPPITKKLLMSFFFLGLTGVFGNQLLFLIGLSYTNPTYAAAVQPTIPVFTFMFTLMMGIERLNLFSYEGLAKAGGTLICVSGAIFMVFYRGPAVIGDNEMDQVAQIKLSVRGQPEPSGWLINSLLDIGLDSFQLGVVFLIGNCICMAAFLAIQAPVLKKYPANLSVTAYSFVFGVALMVIASYFMVNESTEWILTQSEILAVAYAGTIASALNYGIITWSNKILGPTLVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSFIIAGLYIVTWASYREIQETSGVTPNGSWISEPLIHEKNEYHSGRIQGALA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1249 386 PANTHER WAT1-RELATED PROTEIN 21 383 IPR030184 GO:0016021|GO:0022857
Pvu2g1249 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 145 - -
Pvu2g1249 386 Pfam EamA-like transporter family 208 345 IPR000620 GO:0016020|GO:0016021
Pvu2g1249 386 Pfam EamA-like transporter family 21 145 IPR000620 GO:0016020|GO:0016021
Pvu2g1249 386 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 21 383 - -
Pvu2g1249 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1249 Pvu-Chr2 24464953 24470016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1249 103 374 Nodulin-like Gene Family AT5G45370 60.145 4.84e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1249 - - gmx:100793730 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1249 2 24464953 24470016 Pvu2g1249 2 24464953 24470016 ECH