Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1248 ATGGCAGCAGTATCAGTGAGGAGTGACGCGTGGAAGGCTCATGTGTGCATGCCACTTGTGCCACTATTCTATGCTGGCTACAATGTAATCACCAAAGTGGCCCTTAATGTTGGGGTGAACCAACTAGTTTTCTGCTTCTACAGGGATCTTCTTGCCTTCACTATTCTTGCTCCTCTCGCTTTTTTTCTTGAAAGACGGACTAGACCGCCCATCACCAAGAAGCTATTGATGTCATTCTTCTTTCTTGGATTGACCGGGGTGTTTGGCAACCAGCTTTTGTATCTTATTGGTTTAGGTTATACTAATCCTACATATGCTGGTGCTGTACAGCCAACCGTTCCAGTCTTTACATTTATGTTTACTTTGATGATGGGCATAGAAAGACTGAACTTGTTCAGATATGAAGGTGCCATATTTATGGTTTTCTATCGTGGTCCAGCTGTGATAGGGGATAAAACAATGAATCAAGTTGCACAAATTAAAAAAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATCAACAGCTTACTTGATATTGGACTTGACAGCTTTCAGCTTGGGGTTGTGTTCTTGATAGGGAACTGCATCTGCATGGCTGCTTTTCTAGCCTTTCAGGCACCAGTATTGAAAAAGTATCCTGCAAATCTATCTGTCACAGCGTATTCATTCGGCTTTGGATTTGCACTGATGGTGATTGCATCATATTTCATGGTTAACGAGTCAACTGACTGGATTTTGACACAATCAGAGATACTAGCTGTTGCATATTCTGGAACTATTGCTTCTGCTCTTATCTATGGAATCATTACATGGAGCAATAAGATCTTGGGGCCAACTTTGGTTTCCCTTTACACTCCGCTTCAACCTGCATTTTCTGCCTTCCTTTCCCAAATTTTCCTTGGCACTCCAATTTACCTGGGAAGGGGATCTTTCATCATTGCCGGTCTATATATAGTTACTTGGGCATCTTATAGAGAAAGACAAGAAACCTTTGGAGTTACTGCCAATGGCTTTAGGATCTCTGAACCACTTACTCATGAAAAAAATGAATACCAGAGTGGTCACAGTCAGGGTCCTCCGGGGTAA 1092 0.4258 MAAVSVRSDAWKAHVCMPLVPLFYAGYNVITKVALNVGVNQLVFCFYRDLLAFTILAPLAFFLERRTRPPITKKLLMSFFFLGLTGVFGNQLLYLIGLGYTNPTYAGAVQPTVPVFTFMFTLMMGIERLNLFRYEGAIFMVFYRGPAVIGDKTMNQVAQIKKSARGQPEPSGWLINSLLDIGLDSFQLGVVFLIGNCICMAAFLAFQAPVLKKYPANLSVTAYSFGFGFALMVIASYFMVNESTDWILTQSEILAVAYSGTIASALIYGIITWSNKILGPTLVSLYTPLQPAFSAFLSQIFLGTPIYLGRGSFIIAGLYIVTWASYRERQETFGVTANGFRISEPLTHEKNEYQSGHSQGPPG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1248 363 PANTHER WAT1-RELATED PROTEIN 14 359 IPR030184 GO:0016021|GO:0022857
Pvu2g1248 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 327 - -
Pvu2g1248 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 140 - -
Pvu2g1248 363 Pfam EamA-like transporter family 188 318 IPR000620 GO:0016020|GO:0016021
Pvu2g1248 363 Pfam EamA-like transporter family 17 141 IPR000620 GO:0016020|GO:0016021
Pvu2g1248 363 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 14 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1248 Pvu-Chr2 24452760 24460093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1248 96 351 Nodulin-like Gene Family AT5G45370 53.986 3.77e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1248 - - gmx:100793730 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1248 2 24452760 24460093 Pvu3g2870 3 50446885 50456149 PCT