Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1247 ATGGCAACAGTTGGAGTTGGAGTGGGTGCGGGGGGTGACATATGGAAGGCCCATATGGCCATGGCCATGGTGCAGCTTTTCAGTGGCGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCATCAACCAGTTAGTCTTCTGCGTATTCCGCGATCTCCTTGCCCTTTCCATCCTCGCACCCCTTGCTTATATCCGTGAAAAACGGATTCGACCACCCACTACTAAGAACCTCCTGGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCGGCTGCCATACAACCAGCCATTCCGGTCTTTACCTTTATGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTAGTCAGATATGATGGTCTGGCAAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCCGTATTGATGGTTTTGTATCGTGGTCCAGCTTTGGTAGGATATACTGAAATCGATCATGTTGTACAAAATGAAATAAGTGCCAAGGGTCAGCCAGAGCCATCTGGATGGCTAATTGGTAGTTTACAGGACTTCGGGTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCGGTATTAAAAAAATATCCCGCAAACATATCGGTCACAGCATTTTCATACTTCTTCGGAACTTTACTAATGGTGATAGTATCATTATTCATGAATAACGAGTCAACTGACTGGAGTTTGACATCATCAGAAATCCTTGCTGTTCTTTATGCTGGAACTGTTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAAATCTTGGGCCCAGCCATGGTTTCCCTTTACAATCCGCTTCAACCTGCGTTTTCAACCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTTCTTGGGAAGCATCTTAGGAGGTTCTCTCATCATTGCTGGTCTATATTTAGTTACTTGGGCATCTTTTAGAGAAAAACAAGCAACTCTTGGAGTTGGAGTAGCTAATCTTGCCTCTTGGGTCTCAGAACCACTTGTTCACGACAGAAGTGCACTTCAGAAAGGCCACGCTTTTTCGGGGTCCTCCACCGTTCCCTCCAAAACATTATCAGATTAA 1185 0.4447 MATVGVGVGAGGDIWKAHMAMAMVQLFSGGYHVITKVALNVGINQLVFCVFRDLLALSILAPLAYIREKRIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPAIPVFTFMLAVMMGTERVNLVRYDGLAKVGGTIICVSGAVLMVLYRGPALVGYTEIDHVVQNEISAKGQPEPSGWLIGSLQDFGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAFSYFFGTLLMVIVSLFMNNESTDWSLTSSEILAVLYAGTVASALNYGLITWCNKILGPAMVSLYNPLQPAFSTILSQIFLGSPIFLGSILGGSLIIAGLYLVTWASFREKQATLGVGVANLASWVSEPLVHDRSALQKGHAFSGSSTVPSKTLSD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1247 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 348 - -
Pvu2g1247 394 PANTHER WAT1-RELATED PROTEIN 14 384 IPR030184 GO:0016021|GO:0022857
Pvu2g1247 394 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020|GO:0016021
Pvu2g1247 394 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020|GO:0016021
Pvu2g1247 394 PANTHER WAT1-RELATED PROTEIN 14 384 - -
Pvu2g1247 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1247 Pvu-Chr2 24445691 24450876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1247 13 276 Nodulin-like Gene Family AT3G45870 70.833 2.77e-125 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1247 - - gmx:100787738 636.721