Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1238 ATGATTCCCCTCCAATGCAACAACATGGCAGCTTACTCCGCCGCCATCGCCGTCATCACCACCATCCTTTTCCTGTTCCCGGCGCCGACTTCCCAAGCCCAAATTCTCAAGACACAAGCCCACGTTTTTGGTCCCTTCAACCAATCCTACTTCAACACGTTCGCGGTGCTGCCCAGCGCCGCCATCAACCTGGAAGCGCTCCAAGTAACACCAGACAGCACCGGCAACGTCTCCCTGGCTAACCGATCCGGCAGAGTCTTCTTCAACACCCCCTTCACTCTCTGGGACGACCAAGATAGCCTCGACGGAAAACTCGTCTCCTTCAACACTTCCTTTCTGATAAACGTGTACCGTCCCAAAAACGAAACTCCCGGCGAGGGCATGGCCTTCTTCATCGCGCCTTCTCCCTCCACCCCTCCTCTCAACAGCCACGGCGAGTTTCTCGGCCTCACCAACGCCTCCACCGACGGCAACCGCACCAACCAAATCGTCGCCGTTGAACTTGACACCGTGAAGCAGGACTTCGACCCCGACGACAACCACATCGGCCTGGACATTAACGGCGTGAGGTCCAACGTCACTGTGTCTCTCACTCCCTTGGGGTTCGAGATCGCGCCCAACGTCACGCGCCTCCACGTGCTGTGGGTGGAGTATCACGGCGACCGGAAGGTGATCGACGTGTACATCGCGGAGCAGGCTGATAAGGACGCGCCCATAGTGGCAAAACCAGCTAAGCCGGTTTTGAGTTCAAGTCTTGATCTGAAACAAGTGGTGAACAGGGTTTCTTATTTTGGGTTCTCTGCTTCGACCGGTGACAACGTTGAACTAAACTGCGTGCTGAGGTGGAACATTTCCATTGAAGTTTTTCCCAAGAAAAAGGGTGTCGGAAATGCGTTGAAGATTGGATTGGGTGTTGGAGTGCCTCTGGTGGTTCTTCTTGCAGCGGGTGTTGTAGGGTGGGTTTATTGGTTGAAGAGAAAGCAGAGAGAAAGTGAGACTCAGATTTTGGGAACTCTCAAGAGTTTACCTGGAACTCCCAGAGAGTTCAGGTTTCAAGAATTGAAGAAAGCCACTAATAATTTCGATGAGAAGCATAAGCTCGGACAAGGTGGATACGGCGTCGTTTTTAGAGGAACACTTCCGAAGGAGAAGTTGGAAGTAGCCGTTAAAATGTTCTCCAGAGATAAGATGAAAAGCACGGATGATTTCTTGGCTGAACTCACCATCATCAATCGCCTTCGTCACAAAAACCTTGTTCGCTTACTCGGGTGGTGTCACAGAAATGGGGTGTTGCTGTTAGTGTACGATTACATGCCCAATGGAAGTTTGGACAACCACATTTTCTGTGAGGAAGGGAGAAGCACTAGCCCACTAAGTTGGCCTTTAAGGTACAAGATCATAGCAGGGGTGGCTTCTGCATTGAACTACCTGCACAACGAGTATGATCAGAAAGTGGTCCACAGAGACCTTAAGGCCAGCAACATCATGCTGGACTCAGACTTCAATGCTCGTTTAGGTGACTTCGGTCTGGCTCGTGCATTGGAGAATGATAAAACATCTTATGCAGAGTTGGAAGGAGTGCATGGCACCATGGGGTACATTGCACCTGAGTGCTTCCACACGGGGAGGGCCACAAGGGAATCGGATGTTTATGGGTTTGGAGCAGTGGTCCTTGAGGTGGTGTGTGGTCAAAGACCATGGACCAAGAATGAGGGGTATGAGTGCTTGGTGGATTGGATATGGTTCCTGCATCGTGAGCAAAGGATACTTGATGCAGTGGATCCAAGACTTGGGAATGACTGTGTGGCTGAAGAGGCAGAGAGGGCTCTGAAATTAGGACTAGCATGTTCTCACCCCATTGCCAGTGAGAGACCAAAGATGCAAACAATTGTGCAGATCATATCTGGTTCAGTGCCTGTGCCTCATGTTCCCCCTTTCAAGCCAGCTTTTGTGTGGCCAGCCATGGACCTATCAAGCCTTGCAAGTGAGCTCACACAAACCACAACAACAGAGTACACACCCATGAACAGTACCACACATTCTACACATGTTGATTTCTCAGATAGTGGTTCTCTCGTCTAA 2082 0.5086 MIPLQCNNMAAYSAAIAVITTILFLFPAPTSQAQILKTQAHVFGPFNQSYFNTFAVLPSAAINLEALQVTPDSTGNVSLANRSGRVFFNTPFTLWDDQDSLDGKLVSFNTSFLINVYRPKNETPGEGMAFFIAPSPSTPPLNSHGEFLGLTNASTDGNRTNQIVAVELDTVKQDFDPDDNHIGLDINGVRSNVTVSLTPLGFEIAPNVTRLHVLWVEYHGDRKVIDVYIAEQADKDAPIVAKPAKPVLSSSLDLKQVVNRVSYFGFSASTGDNVELNCVLRWNISIEVFPKKKGVGNALKIGLGVGVPLVVLLAAGVVGWVYWLKRKQRESETQILGTLKSLPGTPREFRFQELKKATNNFDEKHKLGQGGYGVVFRGTLPKEKLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFCEEGRSTSPLSWPLRYKIIAGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALENDKTSYAELEGVHGTMGYIAPECFHTGRATRESDVYGFGAVVLEVVCGQRPWTKNEGYECLVDWIWFLHREQRILDAVDPRLGNDCVAEEAERALKLGLACSHPIASERPKMQTIVQIISGSVPVPHVPPFKPAFVWPAMDLSSLASELTQTTTTEYTPMNSTTHSTHVDFSDSGSLV* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1238 693 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Pvu2g1238 693 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Pvu2g1238 693 CDD lectin_legume_LecRK_Arcelin_ConA 51 283 IPR001220 GO:0030246
Pvu2g1238 693 CDD STKc_IRAK 367 634 - -
Pvu2g1238 693 Pfam Protein kinase domain 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1238 693 ProSiteProfiles Protein kinase domain profile. 361 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1238 693 Gene3D Transferase(Phosphotransferase) domain 1 438 638 - -
Pvu2g1238 693 Pfam Legume lectin domain 53 287 IPR001220 GO:0030246
Pvu2g1238 693 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Pvu2g1238 693 SMART serkin_6 361 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1238 693 PANTHER - 29 678 - -
Pvu2g1238 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Pvu2g1238 693 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 29 678 - -
Pvu2g1238 693 Gene3D - 39 297 - -
Pvu2g1238 693 MobiDBLite consensus disorder prediction 672 693 - -
Pvu2g1238 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 290 IPR013320 -
Pvu2g1238 693 SUPERFAMILY Protein kinase-like (PK-like) 343 663 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1238 Pvu-Chr2 24286452 24289665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1238 83 663 Receptor kinase-like Gene Family AT5G55830 37.622 5.28e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu2g1238 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1238 - - gmx:100780014 1185.24