Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1215 ATGAAAACTTGTTCTGTTTTAAGCTCTCCGTTTTCCCTATTTCTTCTCCTTTTTCTCTTCTTCTCCTTCCTCACCTTCTCCACCTCACAATCCCAACTCTCCCTTCGCCCTTCTCCACCCTCAGTTAAACCGGCCACCGCTCTCGTCGCCGCCCTTGATGGCACCGTGTATTTGGTGGACAGTGATTCTGGAAGGGTCTTTTGGTCTTTTTCAACTGGATCTCCAATCTACTATTCCTATCATGCTCCCATCAACAACCCTAACCACAACTTCACCGCCTTCGTTGAATGTGGAGATGATTGGGAATTAATCGTCCACGACCCCCACTTGGGTCAAACGAGACTATCGAAATCGATTGAAGAGTATGTTGCTTCTACCCCTATCAAGACAAAGGATGGAGCATCGGTATTTGGTCACAAGAGAACCACTATGTATGTAGTTAATGCTAAAACTGGAGGGCTTTTTCGAAGTTACTCTGAACATGATCATGCTTCTAATGTGGTGTCGAGTTTTGATGACCGGCTGCATGTTTCAAGTACGAAGGATAATGAGCTTGTTGATCCTGCCCAGCTGAAGCCACCTGAGTTCTTGCTTGAGATAACTAGGACGGATTATACTTTGCAATCCGTTGTTCCTGGTTCTGGGGTAGTTTTGTGGACTATGAAAGTGGCTGAATTTAAGGCTGCATTGGTTTGCCCACATACTTCTGGAAGGATTTCATTAGATGCAGAGGGTGGGTATGATTTGGACGGTGGCTTAGATTTTGCTATGCCCTATGCATGTTGGGACATGAAACTGAATGAAGTATATCGCCAACGTAAGAAATTTTTGATAGAATCTGCTGAGAGATTGTCTGAGGTTTATGAGGAGGTTGATATGCTTCCATTTCGTACTTCAGAGCTCATGCTTCCATCAAAACCTGCTACTGATCAATTTGTCCTAGGCCAGGATGGATATACGATCCTATCTTTGCCTATGCCAAATTCTTTGCCTTCTTTGCAACAAAAAAATGGCTTCTTTGAGAGCAATGATAATGTACCTATGCTCCCTCGGTCTCGTATGGAGATCACTACAGAAGAAGTTGATCCAGGCAGGGTGAATAAATGGTCAAAAACAGTACCTCTTGTATTATTTACCATCTTTCTTGGTTCTTTCATTATATACCAGTCTCTTTTCTTTACAAATAAAGACCAGAATAGGGAGATAAATACCAAAAGTTCACCTCCTAAGAAGAAGAAAGCCCGCAAGTCAATAAAGAACAACATCATTGCTGTCACACAGAATAAGCAATCGTTATTGGTCCAGGAGGAGGACACATTCACACTTAATGAAACAAACTCCAGTACACAGGTGCAAGTTGATGGACGCAGGATCGGTAAACTATTTGTATCTAATAAAGAAATTGCTAAGGGAAGCAATGGTACTGTTGTCCTTGAGGGGACATACGAAGGTCGGACAGTTGCTGTCAAACGTCTTGTGCAAAGTCATCACGATGTAGCCCATAAAGAAATCCAAAATCTTATTGCATCTGACAGACATCCAAACATTGTTCGATGGTATGGGGTGGAATGCGATCATGATTTTGTTTACCTTGCTCTGGAACGCTGTACATGCAACTTGGACCATTTGATTCATTTGTACTCTGATATATCAGATAATCCAGCAGTTAGAACTTCTCAAATGCAGACAGAGAAGATTGTTATGCACAATCTTTGGAAAACAAATGGTTTTCCATCACCTCTGCTACTTAAACTGATGAGGGATGTAGTTTCTGGGCTTGTTCATTTGCATGAATTAGGAATAATCCATCGGGACTTGAAACCTCAAAATGTTTTGATAATAAAAGAAAGATCATTAGTTGCAAAGCTTTCTGACATGGGAATTAGCAAACGCCTTCTCGAAGATATGTCTTCTCTAGGTGAAAGTGTTACGGGCTGTGGCAGTTCAGGCTGGCAAGCACCGGAGCAACTTGTTCAAGGGCGTCAAACACGAGCTGTGGATTTATTTAGTTTAGGTTGTGTCCTCTTTTTCTGCATGACTGCAGGAAGACATCCATTTGGAGAGCGGCTTGAGCGTGATGTCAATATTGTTAAAAATCAAAAAGATCTTTTCTTAGTGGAGTTTATTCCTGAAGCCGAGGATCTTATTTCTTGTTTGTTAAACCCTAATCCTGATCTTAGGCCAATGGCGATTGAAGTATTGCAACATCCTCTCTTTTGGAGCTCTGAGATGAGACTTTCATTTTTTCGCGATGTTAGTGATAGGGTGGAACTTGAAGATAGAGAATACGGTTCTGATCTTTTGAAGGCATTAGAAAGCACTGCTCCACTGGCTTTAGGTGCAAAATGGGATGAGAAGCTAGATCCTGATTTCGTTACTAACATTGGTCGTTACCGGAGATATAAATTTGACAGTGTTCGGGACTTGTTGAGGGTCATGAGAAATAAGCTAAATCATTACAGGGAACTGCCTCATGAAATCCAGGAACTGATAGGTCCTCTTCCAGAAGGATTCAATGACTACTTTGCAAGTCGATTCCCAAGGCTCTTGATTGAAGTGTACAAAGTTATATACAGAAATTGCAAGAACGATGAATGTTTTCAAAGATATTTTAGATACATTAACTAG 2628 0.4144 MKTCSVLSSPFSLFLLLFLFFSFLTFSTSQSQLSLRPSPPSVKPATALVAALDGTVYLVDSDSGRVFWSFSTGSPIYYSYHAPINNPNHNFTAFVECGDDWELIVHDPHLGQTRLSKSIEEYVASTPIKTKDGASVFGHKRTTMYVVNAKTGGLFRSYSEHDHASNVVSSFDDRLHVSSTKDNELVDPAQLKPPEFLLEITRTDYTLQSVVPGSGVVLWTMKVAEFKAALVCPHTSGRISLDAEGGYDLDGGLDFAMPYACWDMKLNEVYRQRKKFLIESAERLSEVYEEVDMLPFRTSELMLPSKPATDQFVLGQDGYTILSLPMPNSLPSLQQKNGFFESNDNVPMLPRSRMEITTEEVDPGRVNKWSKTVPLVLFTIFLGSFIIYQSLFFTNKDQNREINTKSSPPKKKKARKSIKNNIIAVTQNKQSLLVQEEDTFTLNETNSSTQVQVDGRRIGKLFVSNKEIAKGSNGTVVLEGTYEGRTVAVKRLVQSHHDVAHKEIQNLIASDRHPNIVRWYGVECDHDFVYLALERCTCNLDHLIHLYSDISDNPAVRTSQMQTEKIVMHNLWKTNGFPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIKERSLVAKLSDMGISKRLLEDMSSLGESVTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNQKDLFLVEFIPEAEDLISCLLNPNPDLRPMAIEVLQHPLFWSSEMRLSFFRDVSDRVELEDREYGSDLLKALESTAPLALGAKWDEKLDPDFVTNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPHEIQELIGPLPEGFNDYFASRFPRLLIEVYKVIYRNCKNDECFQRYFRYIN* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1215 875 Gene3D - 25 242 IPR015943 GO:0005515
Pvu2g1215 875 SMART PGNneu 804 858 - -
Pvu2g1215 875 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 28 871 - -
Pvu2g1215 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Pvu2g1215 875 Pfam Ribonuclease 2-5A 745 871 IPR010513 GO:0004540|GO:0006397
Pvu2g1215 875 ProSiteProfiles KEN domain profile. 742 873 IPR010513 GO:0004540|GO:0006397
Pvu2g1215 875 ProSiteProfiles Protein kinase domain profile. 462 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1215 875 Gene3D Phosphorylase Kinase; domain 1 447 534 - -
Pvu2g1215 875 Pfam Protein kinase domain 464 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1215 875 PANTHER IRE1-RELATED 28 871 IPR045133 GO:0004521|GO:0004674|GO:0030968
Pvu2g1215 875 SMART serkin_6 462 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1215 875 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 46 193 IPR011047 -
Pvu2g1215 875 Gene3D KEN domain 742 874 IPR038357 -
Pvu2g1215 875 CDD RNase_Ire1 743 871 - -
Pvu2g1215 875 SMART ire1_9 127 159 IPR018391 -
Pvu2g1215 875 SMART ire1_9 40 71 IPR018391 -
Pvu2g1215 875 Gene3D Transferase(Phosphotransferase) domain 1 563 741 - -
Pvu2g1215 875 SUPERFAMILY Protein kinase-like (PK-like) 454 750 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1215 Pvu-Chr2 23805428 23812137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1215 488 738 MAP Kinase Kinase Kinase AT3G06030 27.843 1.41e-20 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Pvu2g1215 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1215 K08852 - gmx:100785363 1258.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1215 2 23805428 23812137 Pvu2g1215 2 23805428 23812137 ECH
Pvu2g1215 2 23805428 23812137 Pvu3g2789 3 49683146 49690613 PCT