Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1213 ATGAGTGGTGGTGTTAGTGGTGCATGCCCCTGCCCCAGGCGTAGTAGTGAGGGTTCCATGGAGGACCTGAATGGGGATACGGTGGGGAATTTGAATCAGAATTCAGGGAAGCCTCCCAGGGACTATTCGTCTATGCGACATTTCAGCAGCTCTTCTTGGTCTGCTGAACCGGTATTTGATGGACATGGTGGTGTTGACGCAGCATCATTTACGAGAAAGAACATCCTCAAGTTTATAGTTGAAGATGCCCATTTCCCCTTTGGCATTAAGAAAGCAATTAAGAGCGCATTTGTGAAGGCTGATCTTGCTTTTAGAGATGCCAGTGCTCTTGATAGCTCTTCAGGCACCACCGCTCTGATAGCCTTTATGTTGGGAAGTTCCATGCTGATTGCCAATGCAGGAGATTCTCGTGCTGTATTGGGAAAACGGGGCAGAGCCGTTGAACTTTCCAAAGACCATAAACCAAATTGCACTTCTGAAAGATTAAGAATTGAAAAACTGGGTGGGGTTATCTATGATGGATACCTCAATGGCCAACTATCAGTTGCTCGTGCTCTTGGAGATTGGCACATAAAAGGCACTAAAGGTTCTAAGAGTCCTTTAAGCTGCGAGCCGGAGCTGGAGGAGATTGTGCTGACCGAAGAGGATGAGTTTTTGATAATGGGCTGTGATGGATTGTGGGATGTGATGAGCAGCCAGTGTGCCGTGACAATGGTGAGGAAGGAGCTCATGCAGCATAATGATCCCAACAAATGCGCAAAAGTACTTGTTTTGGAGGCCCTCCAACGCAACACATGTGACAACCTCACAGTAGTGATTGTGTGTTTCTCCAAAGATCCACCTTCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 933 0.4652 MSGGVSGACPCPRRSSEGSMEDLNGDTVGNLNQNSGKPPRDYSSMRHFSSSSWSAEPVFDGHGGVDAASFTRKNILKFIVEDAHFPFGIKKAIKSAFVKADLAFRDASALDSSSGTTALIAFMLGSSMLIANAGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSKSPLSCEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPNKCAKVLVLEALQRNTCDNLTVVIVCFSKDPPSKIEIPRSYRRRSISAEGLDLLKGVLNGR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1213 310 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 58 297 - -
Pvu2g1213 310 ProSiteProfiles PPM-type phosphatase domain profile. 44 276 IPR001932 -
Pvu2g1213 310 MobiDBLite consensus disorder prediction 1 46 - -
Pvu2g1213 310 Pfam Protein phosphatase 2C 49 268 IPR001932 -
Pvu2g1213 310 MobiDBLite consensus disorder prediction 21 46 - -
Pvu2g1213 310 CDD PP2Cc 58 276 IPR001932 -
Pvu2g1213 310 PANTHER PROTEIN PHOSPHATASE 2C 58 297 IPR015655 GO:0004722|GO:0006470
Pvu2g1213 310 SUPERFAMILY PP2C-like 50 277 IPR036457 -
Pvu2g1213 310 Gene3D - 28 281 IPR036457 -
Pvu2g1213 310 SMART PP2C_4 32 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1213 Pvu-Chr2 23793943 23797122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1213 47 308 PP2C-type Phosphatase Gene Family AT3G51470 79.771 2.09e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1213 K14803 - gmx:100781874 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1213 2 23793943 23797122 Pvu2g1213 2 23793943 23797122 ECH