Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1210 ATGTCGTGTTCGTCGTCGTCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGTTACCATGCCGTCAGAGTCGCCGATCAGTTTGGCGGCGGCAGGTACATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTCTCCACCGTCTGGCTTGCTTACGATACTAAAACTTCTTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCTGCCCTTCATGAGATTGATTTTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTAATTCAATTGATTGACAACTTTAAGCACACTGGTCCAAATGGGCAGCATCTTTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGTTTGATCAAATATAACCGTTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCATTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGATCTAAAACCTGAAAACATTCTTCTGTGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGTCTCTCCCCAATTCTAGAGCGGCCTGAGGGAAACCCAAATGGTGGTGTATCAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCCGGAAGAAGAGGGTCAATGGGAGGAAGTGGAGATATTGCAAAGAATGATAGAAATATTAATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAGTGCGTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAAACAAGACAGTACAGAGCACCTGAAGTTATACTGACATCTGGATATTCCTTCTCCGTTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAACTAGCCACTGGAGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTATTGGTGGAGGTCAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCATTAGACAAATTGCTGACTGATAGATATAAATTTTCAGTTAAAGATGCTCAAGAGTTTTCAGAATTTCTTCAACCACTCTTTGATTTTGCACCGGAGAAGCGACCAACTGCCCGAAAGTGCCTGGAACATCCATGGCTGAACTGCATGGAGTCCCCTCCAAATGAAACTGCTAAGGAAAAAGTTGATGATGTTGGGATGAGCAACCTCGAAATCAGGGTGGGAAAGTGA 1329 0.4327 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAQFVQAALHEIDFLSSIADHDPSNSKFVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCILIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNPNGGVSSLIEKRLKRRARSAVAKISGRRGSMGGSGDIAKNDRNINGIDVRCKIVDFGSACWADKQFAEEIQTRQYRAPEVILTSGYSFSVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAIGGGQSKDFFDRHGDLKRIRRLKFCPLDKLLTDRYKFSVKDAQEFSEFLQPLFDFAPEKRPTARKCLEHPWLNCMESPPNETAKEKVDDVGMSNLEIRVGK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1210 442 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1210 442 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 442 - -
Pvu2g1210 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pvu2g1210 442 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Pvu2g1210 442 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Pvu2g1210 442 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 442 - -
Pvu2g1210 442 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1210 442 SUPERFAMILY Protein kinase-like (PK-like) 34 421 IPR011009 -
Pvu2g1210 442 CDD STKc_SRPK 27 413 - -
Pvu2g1210 442 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1210 442 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1210 442 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1210 Pvu-Chr2 23758316 23762339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1210 4 414 EF-hand Containing Proteins AT5G22840 50.972 3.55e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pvu2g1210 Pkinase 2.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1210 K08832 - gmx:100784192 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1210 2 23758316 23762339 Pvu2g1210 2 23758316 23762339 ECH
Pvu2g1210 2 23758316 23762339 Pvu3g2784 3 49650468 49655116 PCT