Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1206 ATGGGAGGCTTATTACACTTTTTCGAATTCAATCAGGGGAGGATGGCCAAGAAAGTCCTTACTCGGAAGAGACATCATGGTGGCTTGGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACACCTCAGAACTTCTGCCCACAACGAAAATTATCATGCAATTATCAAGTAGAAGAAGAGGGCAGGCCGGAGAATAATCGTTATTCAAATGTGGGTTCAATGAAAAAACTGATCAACGAGGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTTGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTCCCATCAGATAAAAGAATAAGTGAAAACGTGGGGAAAAAGTCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCATCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCGAGCCAGATGGATTTTGAGTCATTATACGAAGACATGGATGTTGTTGATGATGATGGATGGAACAAGAGCTTTGGAGAACAAAGGCGGCGGGATCATCCTCAGGATGAGGAACTACAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTCGAGTGTTCGAAGGTTGCTGAAATTGGTAGTGTTCCTAGACGATTGTTTGTTCAACAAAACCTGAACAAGGAAAAGGTGGTTCATAATGAGTTACTTTTACAAAGAGCAGCAGCAGGGAAACTTGCAGATCTTGACAGCCATTCATTCAAAACACCACCACCTGAAAGTTATGGTTCAGAATATCGTGGTGACATGATGGAGTTAGTCCCAGCTACGCAAAGGAAAACCTTTCCTCCTAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTATTGATGAAATCTTGCAACAGATTAGACACGTCTGCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAGAATTGGACCATTTCGACAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGGTTTCTGTGGTTCGAGGGAGTGGAATTGAAACACCTTACAATGAAAAACCATCTGATACTAAACTAATAGCCCGACATATAGTAAAGCAAGTCAGAGAAAGTACGACTAGAGATGCTGACACAAATTTACTCCCCTCAGAATCAACAGGGTCGTTCAAAAGTGAAATGCAATTCAATGGACCAACTTCCCCAGAAATTATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTAAGAAATGTTGTGAGAAGTGAAGCACATGCTGACTTTCCCGAGGGAAAATCAAGGTCACTTGCATTAGACAGCCATAAAGCTGGACTAAAGCAAGTGGGGGATATTATGAAGTACGCAAGTAATTGGGAAATTTCCAAAGAGGAGGCAGAAATACAAACAGGTTCTTTCAGACATGAACTGGATCAAAATATATTTCTGCACAAGGAGTTGTCCCCAAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAAAAAGGACAGATTTAATATTAAGGAACGAGTGTCCAATTTTAGATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGTAGAAGGGTTCAATCAATGGTGGAATCACGTGGCAATGAGTATGGTCCCATGGTGAGAGATTTCACAAGTGGACCAACAGTTCTTATGAACTGCGGTGAGCGGCACGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGCAGCATTCATGAAGACCTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCTGATGTGTCTTCAAGAGATGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCTGGTTTGAATGAACTAAGGAGGCAACTCAATCAACTCGAGTCTGATGGTCCTGATGACTTCACTATAAAACAGGAGGCCGCTGAGTCTGACTTGGACCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGACTGTACTTTGGTTCATGGGATAAGTCTTTATTAAGAGGGGACACATTTGCAAAACCTATTGGCAACACAGTTTATGAAGAAGTGGAAGAATCTCGCAGGAAATGGGTCAAGGAAAATGATGACAGCTGTATGAAGGATCAGAATGAGAATAAGCTAGACCACAAAGTTTTACTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCATTGACATTGTCTAGATTCAGAAGGAATTTAAGTAACTCTTCCATGTTGCCACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGAATTAATACATGACGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATATATTCTAAGATGAAGTGA 2700 0.4141 MGGLLHFFEFNQGRMAKKVLTRKRHHGGLEAPRNSLDLQVQTPQNFCPQRKLSCNYQVEEEGRPENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKRISENVGKKSSEKGVSRRGSSVSWGSSNFNSSSQMDFESLYEDMDVVDDDGWNKSFGEQRRRDHPQDEELQKFKKEFEAYQAARFLECSKVAEIGSVPRRLFVQQNLNKEKVVHNELLLQRAAAGKLADLDSHSFKTPPPESYGSEYRGDMMELVPATQRKTFPPRSRTLSRDFEESLLMKSCNRLDTSASPTRIVILKPGPDSICNHEENWTISTGTIQGRNSIEDFLEEVKERLKCELQGKIVKKVSVVRGSGIETPYNEKPSDTKLIARHIVKQVRESTTRDADTNLLPSESTGSFKSEMQFNGPTSPEIISRDTRKFLSDRLRNVVRSEAHADFPEGKSRSLALDSHKAGLKQVGDIMKYASNWEISKEEAEIQTGSFRHELDQNIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESRGNEYGPMVRDFTSGPTVLMNCGERHENSTEVPPSPASVCSSSIHEDLWRRTEYLSPISTPDVSSRDDNVVPQVFRDISSGLNELRRQLNQLESDGPDDFTIKQEAAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNTVYEEVEESRRKWVKENDDSCMKDQNENKLDHKVLLDLLNEALSVVLGPPLTLSRFRRNLSNSSMLPPSGKELLNLVWDIIRVSLYPPSDISTYSLDTLVAQHLGSIPWSELIHDEINILERDIECLITDDLVEELTKDIYSKMK* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1206 899 Pfam Domain of unknown function (DUF4378) 722 889 IPR025486 -
Pvu2g1206 899 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Pvu2g1206 899 Coils Coil 677 697 - -
Pvu2g1206 899 MobiDBLite consensus disorder prediction 399 431 - -
Pvu2g1206 899 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Pvu2g1206 899 MobiDBLite consensus disorder prediction 120 145 - -
Pvu2g1206 899 MobiDBLite consensus disorder prediction 402 431 - -
Pvu2g1206 899 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1206 Pvu-Chr2 23689126 23694996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1206 75 894 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.953 5.59e-150 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1206 - - gmx:100789616 1493.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1206 2 23689126 23694996 Pvu2g1206 2 23689126 23694996 ECH
Pvu2g1206 2 23689126 23694996 Pvu3g2781 3 49623306 49628520 PCT