Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1200 ATGACTGGAAATGTCTATCCAGACCTAGTGAAAGTGTTTTATAACAACCTTGTTCAAGATGGCAAGAATCTTGTGTACTATGTGAAAGGAGTGAAGCTGAAAATCACAAGAGAGCTAAACCTACTTTATGCAATACAGCATGAAAACCTAGTGCCTCTTCTTTGTTACTGTAATGAAAATGATCAACAAATTCTCGTGTATCCTTTCATGCCCAATGGTTCTTGCAAGATAGACTCTATGGAGAGAAAAATATTAGACTGGCCAACTAGACTCTTTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTTCCAGGACGTTCAGTAATACATAGGGACGTTGCAGATTTTGGTTTCTCAAAATATGCTCAAGAAGGAGACAGTAACGTTTCTCTTGAAGTCAGAGGAACTGCAGGGTACCTGGATCCTGAATTCTACAAAACCCTACAATTATCTGAGAAGAGTGATGTCTTCAGCTATGGCGTGGTTTTACTTGAAATTGTGACTGGTAGGGAACCTCTTGACATAAAGAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAGCCATATATAAGAGCATCAAAGATGGAAGAAATTATGGATCCTGGCATCAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGAAGTACTGCAGTGTCTTGAACCATTCTCAGCATATAGACCAAACATGGTGGACATTGTCCGTGAGTTAG 738 0.4119 MTGNVYPDLVKVFYNNLVQDGKNLVYYVKGVKLKITRELNLLYAIQHENLVPLLCYCNENDQQILVYPFMPNGSCKIDSMERKILDWPTRLFIALGAARGLAYLHTFPGRSVIHRDVADFGFSKYAQEGDSNVSLEVRGTAGYLDPEFYKTLQLSEKSDVFSYGVVLLEIVTGREPLDIKRPRNEWSLVEWAKPYIRASKMEEIMDPGIREDTMQRQCGEWWKKYCSVLNHSQHIDQTWWTLSVS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1200 245 Gene3D Phosphorylase Kinase; domain 1 10 70 - -
Pvu2g1200 245 Pfam Protein kinase domain 34 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1200 245 Gene3D Transferase(Phosphotransferase) domain 1 72 235 - -
Pvu2g1200 245 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1200 245 SUPERFAMILY Protein kinase-like (PK-like) 31 221 IPR011009 -
Pvu2g1200 245 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 37 211 - -
Pvu2g1200 245 PANTHER OS07G0568100 PROTEIN 37 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1200 Pvu-Chr2 23601958 23605006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1200 38 228 Receptor kinase-like Gene Family AT2G39360 42.381 3.37e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu2g1200 Pkinase 2.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1200 - - pvu:PHAVU_002G116200g 511.916