Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1198 ATGGATTTCTCACAGACCAACAAAACCACTTTGCTCACCAACCTACTAGTCTTCAACAACACCGTCCAACCAGAGTTGATGAGGAGCCTGCATGTGTACCGGCAAGGGGATGGGGAGGAAAGGACAGTTGAGAGGGAGTTTGTGTTTTCAGACTGTGGCTCCTATGTGGAAATGCAGGCTACCCCAGTTCTTAGATTGGTGAAATCCCATGTTTCTGAAGTGTGCGAAGGGTACAAAAATGGAGTATGGCTTTGTATCTTAGCGTTTCATGCCGATAACACTCCTCAATTTTGCCGCATTCCTCCGCTTTTGTTGGCCTCAAGAAACCCAAAGCTTCAGATGATTCCAAACTTGCTCCGTGATCTCCACATGATCTACAAGTTGGACAGGAAGGAGGAAGACAGACATACAACTCTAGGCTCTACAGGGGAAGAATGTCAAGGGAACAGCAACAATTTCCAACCATCAGAAAAAGTCTTTCCCGTTCTTGATCAGGATCTCAATTATCTTCCTTATGAAGAAGACGAGTCTGAGTTACTGGACAATGAGACAGATGTTGAAAGCTCACCAGGTTTGCCAGGGAAAAAAAAGAGGGCACCCAGTGACCTTGTAGCAAAAATTTCCTTATCAGATTTGGTCCAGTACTTTGGCATGCCTATCGTAGAAGCATCAAGAAATCTAAAAGTTGGGCTTACTGTTCTCAAGAGAAAGTGCAGAGAATTTGGGATTCCACGCTGGCCTCATAGGAAGATCAAGTCACTTGACAGTCTCATTCAGGATCTTCAGGAAGAGGCACAGAACCAAGAATTGGAGAACATGGAAGCAGCAATGGCAGTGGCCAAGAGACAAAAGATGTTGGAGAGTGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATTCAAAGTGAGACCAAGAGGTTCCGGCAAGATGTTTTCAAGAGAAGACACAGAGCAAGAGCTGTTGGAAAACAGAATCCTACTGTATCCAACACATAG 999 0.4464 MDFSQTNKTTLLTNLLVFNNTVQPELMRSLHVYRQGDGEERTVEREFVFSDCGSYVEMQATPVLRLVKSHVSEVCEGYKNGVWLCILAFHADNTPQFCRIPPLLLASRNPKLQMIPNLLRDLHMIYKLDRKEEDRHTTLGSTGEECQGNSNNFQPSEKVFPVLDQDLNYLPYEEDESELLDNETDVESSPGLPGKKKRAPSDLVAKISLSDLVQYFGMPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDSLIQDLQEEAQNQELENMEAAMAVAKRQKMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAVGKQNPTVSNT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1198 332 PANTHER PROTEIN RKD4 17 325 IPR044607 GO:0003700
Pvu2g1198 332 Coils Coil 251 290 - -
Pvu2g1198 332 Pfam RWP-RK domain 207 254 IPR003035 -
Pvu2g1198 332 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Pvu2g1198 332 MobiDBLite consensus disorder prediction 177 198 - -
Pvu2g1198 332 PANTHER PROTEIN RKD5 17 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1198 Pvu-Chr2 23546915 23552190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1198 22 332 AtRKD Transcription Factor Family AT4G35590 47.112 6.74e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pvu2g1198 RWP-RK 3.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1198 - - gmx:113001653 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1198 2 23546915 23552190 Pvu2g1198 2 23546915 23552190 ECH