Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1193 ATGGAAAAGCATAGCCCTTCCTTGGGTCCATTCTCCAACAACTCTCTATCTGCTCCCTCTGCTGACACTCTCACTCTAATTATCAATCCAATCAACGACAATCTTCAGGGTGAAAGCACCATGAAAACCCCGTGGCAAGTGTTGGATGAACTCCGTGGTGAAAGTAGTGATGACAGTGGTGGTGAAAAAGACGTTGTTGGTGGAAGTGGTAATTACATAAGAGATAAGAATGGTGTTGGTGGTGGAAGTGTTGACCGTAATAACAATGGAATCCGTGGCCGGAGTGGTGCTGCTGAGAATGGTAATGGTGGTGATGTTGGTGGTGGGATTCCTCCTGTGACTGTGGCTGTGGCTGTGGCAGTGGGTGGTGGTGGTGGTAGGATGGAGCTGGTGGAGAGTAGTGTTGTGAGGGAGGGAGTGGTGGGGAAAAAGAGAAAGACTTCTATAGTGAGGGACCCTCCCACTGGGAAACCTACTTGTCCTCTTTGCCGCAAAGAGTTTCCAACGTGGAAGGGTGCGTTTGGCCACATGCGCGCACACCCTGACCGTGATTATCGTGGATTCTTCAAACCTCCCGTGTTTGGATCCCCATCCTCAACCCAACATCATCCTCTTACTAATGCTAACAAGGGTAACACCTCACAGTGTGATGGTGGTGAGGTTAACCATGGGGAGAAAGGGTCAGCACCGCCGCCTATTCAAGTTGTGATGTTTGATCTGAATGAACCACCAACTGCAGTGGAGAATGCTGCTGAGTCTGTTACAGAAAAGAGTGATGAGAATGGAAAGATTTTTGGATTTGACTTGAATGCTGAGGGAAATGTTTTTGGATTTGACTTGAACGAGATGCCCTTGACTGAAGAATGA 867 0.4833 MEKHSPSLGPFSNNSLSAPSADTLTLIINPINDNLQGESTMKTPWQVLDELRGESSDDSGGEKDVVGGSGNYIRDKNGVGGGSVDRNNNGIRGRSGAAENGNGGDVGGGIPPVTVAVAVAVGGGGGRMELVESSVVREGVVGKKRKTSIVRDPPTGKPTCPLCRKEFPTWKGAFGHMRAHPDRDYRGFFKPPVFGSPSSTQHHPLTNANKGNTSQCDGGEVNHGEKGSAPPPIQVVMFDLNEPPTAVENAAESVTEKSDENGKIFGFDLNAEGNVFGFDLNEMPLTEE* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1193 288 ProSitePatterns Zinc finger C2H2 type domain signature. 160 180 IPR013087 -
Pvu2g1193 288 MobiDBLite consensus disorder prediction 194 231 - -
Pvu2g1193 288 MobiDBLite consensus disorder prediction 52 110 - -
Pvu2g1193 288 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 57 284 - -
Pvu2g1193 288 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 57 284 - -
Pvu2g1193 288 MobiDBLite consensus disorder prediction 194 219 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1193 139 192 C2H2 Transcription Factor Family AT2G26940 46.429 4.39e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g1193 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1193 - - pvu:PHAVU_002G115500g 522.702