Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1189 ATGGTGATATCAGATGAGAACAGATCTAAACCAGTCAACCCCACAAATTTTCAAGGAGGGATGAATTGTGGGGGAAACAGAAAGGTGGGGCAGAACAGAAGGGCTTTGAGCGTGATCAATCAGGATCTGGTGGCGGAAGGGAGACCTTACCCTTGCGTTGTTAACAAGAGAGCATTGGCAGAAAAACAAGATGTTTGTGAGAAGAAACAGGCGTATCCGGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAGATTGCTAGTAGCACACAGCAAAATCGTGCTGAGGGAACCAAGAGGTCAAACTTGGGGAATTCAAATTCGAATGGATTTGGAGAGGCTATATTTGTGGATGATGAACACGCACCAACGGATGACCAACCAGTGCCAATGTCTTTAGAACTGACAGAGCCAATTCATAGTGAATTAGATCAGATGGAGGAAGTTGAAATGGAGGATATAATTGATGAGACTGTTTTGGACATTGATATATGTGACGCAAACAATCCCCTTGCAGTGGTGGATTATATTGAAGATCTTTACGGCTACTACAGAAAAACGGAGAGTACTAGCTGTGTCTCGCCCAATTACATGACACAGCAATTTGACATTAATGAAAGGATGAGGGCTATTCTCATTGACTGGCTTATTGAGGTGCACGACAAATTTGATCTCATGCACGAGACATTGTTTCTTACTGTTAATCTTATAGACAGATTTTTGGCAAAACAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGATTAGTTGCAATGCTTTTGGCATGCAAGTACGAAGAAGTTTCAGTTCCTGTGGTGGGGGATCTAATTCTCATATCAGACAAAGCATACACAAGGAAGGAAGTTCTGGAAATGGAGAAGCTGATGGTCAACACATTGCAGTTTAACATGTCTGTGCCAACCGCATATGTTTTTATGAAAAGATTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGCTACTGGCTTTCTTCATGGTAGAGCTATCTCTAGTAGAATATGAGATGCTGAAGTTCCCTCCATCCTTACTAGCAGCAGCTGCTGTTTATACAGCTCAATGCTCCATTTATGGCTTCAAACAGTGGAGTAAAACATGTGAATGGCACTCCAATTACTCAGAAGATCAGCTATTAGAGTGCTCTACATCAATGGTTGATTTTCATCAGAAGGCTGGGAATGGGAAACTTACTGGGGTACATAGGAAGTACTGTTCATCAAAATTTAACTACACTGCAAAATGTGAACCGGCACGTTTTCTTCTGGAGAACTCGTTGTAG 1299 0.4242 MVISDENRSKPVNPTNFQGGMNCGGNRKVGQNRRALSVINQDLVAEGRPYPCVVNKRALAEKQDVCEKKQAYPVHRPITRRFAAQIASSTQQNRAEGTKRSNLGNSNSNGFGEAIFVDDEHAPTDDQPVPMSLELTEPIHSELDQMEEVEMEDIIDETVLDIDICDANNPLAVVDYIEDLYGYYRKTESTSCVSPNYMTQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFMKRFLKAAQADRKLELLAFFMVELSLVEYEMLKFPPSLLAAAAVYTAQCSIYGFKQWSKTCEWHSNYSEDQLLECSTSMVDFHQKAGNGKLTGVHRKYCSSKFNYTAKCEPARFLLENSL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1189 432 Pfam Cyclin, C-terminal domain 307 422 IPR004367 -
Pvu2g1189 432 Gene3D - 179 419 - -
Pvu2g1189 432 PANTHER CYCLIN-B2-1 22 427 - -
Pvu2g1189 432 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Pvu2g1189 432 Pfam Cyclin, N-terminal domain 180 305 IPR006671 -
Pvu2g1189 432 CDD CYCLIN 305 392 IPR013763 -
Pvu2g1189 432 MobiDBLite consensus disorder prediction 86 113 - -
Pvu2g1189 432 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
Pvu2g1189 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Pvu2g1189 432 MobiDBLite consensus disorder prediction 1 28 - -
Pvu2g1189 432 CDD CYCLIN 208 297 IPR013763 -
Pvu2g1189 432 SMART Cyclin_C_2 307 424 IPR004367 -
Pvu2g1189 432 SMART cyclin_7 311 393 IPR013763 -
Pvu2g1189 432 SMART cyclin_7 214 298 IPR013763 -
Pvu2g1189 432 Gene3D - 193 305 - -
Pvu2g1189 432 PANTHER CYCLINS 22 427 IPR039361 -
Pvu2g1189 432 MobiDBLite consensus disorder prediction 86 112 - -
Pvu2g1189 432 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1189 Pvu-Chr2 23384044 23387166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1189 1 428 Core Cell Cycle Gene Families AT1G20610 58.257 3.09e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1189 K21777 - gmx:100798068 772.696