Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1185 ATGGCTTGTCTCAGCCGCCACCACCACCGCGCCTGGCTCACTACCCAAGACATGGTCCAACGCTGCCCTCTCTCCGCCCACCACTGCCGTCTCAACGACGACGCCGACGCAGACCCCATTTCCCTCCGCTCTCTCTCCTCCGCCCACCGTCTCTTCCCCGTCTACGCCATGGGCGCCCCCGACCCCACACCCGAACCCGAATTGGACGGACCCGACCCTATTTGGAACGCCGTCAGAGACGAGGCCAAGCTCGAGGCGGAGAAGGAGCCGATTTTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCATGATTGCTTCGAACAGGCATTGGCCTTTGTCGTCGCCAACCGTCTCCAAAACGCTACTCTCTTGGCCACTCAGCTCATGGATATTTTCTGCAATGTCATTCTGCATGACAAACCTATCCAACGATCCATTCGCCTTGATGTTCAGGCATTTAAAGATCGGGACCCTGCGTGTTTGTCCTATTGCTCCGCACTTTTGTACATGAAGGGTTATCATGCTCTGCAAGTACATCGAGTAGCCCATGCATTGTGGCACCAAGGACGTAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTTAGTGAGGTTTTTGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCATTGATGCATGGTGTAACATTAGGAGGCACAGGGAAGGAAATAGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTAATTGGAGCTAGTGCAACCATACTTGGGAATATAAAGATTGGTGAAGGTGCGATGATAGCTGCAGGTTCCCTTGTGTTAAAAGATGTTCCTCCCCACAGCATTGCGGCTGGAATACCAGCTAAAGTTATTAGTGGTCTACAGGACCATGATCCATCTTTAACCATGAAGCATGATGCTACTAAAGATTTTTTCTCGCAAGTAGCTAATAACTTCAGAGATGAAATGCCCAATGGATCTCAAAATCCAGATAGAAATGAAGTTAACAATTGA 1068 0.4981 MACLSRHHHRAWLTTQDMVQRCPLSAHHCRLNDDADADPISLRSLSSAHRLFPVYAMGAPDPTPEPELDGPDPIWNAVRDEAKLEAEKEPILSSFLYASILAHDCFEQALAFVVANRLQNATLLATQLMDIFCNVILHDKPIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHSIAAGIPAKVISGLQDHDPSLTMKHDATKDFFSQVANNFRDEMPNGSQNPDRNEVNN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1185 355 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 16 338 - -
Pvu2g1185 355 Gene3D Hexapeptide repeat proteins 208 336 - -
Pvu2g1185 355 Pfam Bacterial transferase hexapeptide (six repeats) 258 291 IPR001451 -
Pvu2g1185 355 SMART SATase_N_2_a 74 178 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu2g1185 355 PANTHER SERINE ACETYLTRANSFERASE 16 338 - -
Pvu2g1185 355 CDD LbH_SAT 205 305 IPR045304 -
Pvu2g1185 355 TIGRFAM cysE: serine O-acetyltransferase 146 307 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pvu2g1185 355 Pfam Serine acetyltransferase, N-terminal 74 177 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pvu2g1185 355 SUPERFAMILY Trimeric LpxA-like enzymes 73 322 IPR011004 -
Pvu2g1185 355 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 267 295 IPR018357 GO:0016740
Pvu2g1185 355 Gene3D serine acetyltransferase, domain 1 60 207 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1185 Pvu-Chr2 23320985 23325486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1185 52 344 Miscellaneous Gene Families AT2G17640 72.542 6.89e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1185 K00640 - gmx:100775449 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1185 2 23320985 23325486 Pvu2g1185 2 23320985 23325486 ECH
Pvu2g1185 2 23320985 23325486 Pvu3g2768 3 49524102 49527349 PCT