Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1173 ATGGCTTCCCTTGATGGTCACAACACTAATGAAACTTCATTCAATCATGTTGAGATTCCTGTTCATGCAGTTGGTGTAGAGCCAAAACCAAACCAAGAAATTGAAGAGAGAAACATAGACTATTCTCAGAGGGCGAATTGGCTGCGTGCAGCAGTGTTAGGAGCCAATGATGGTTTAATCTCAGTTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAGAACATCACAGCCATGCTTCTTGCTGGTTTTGCAGGCTTAATTGCTGGGGCATGCAGCATGGCAATTGGAGAGTTTGTGTCTGTGTACACTCAATATGACATAGAAATAGCTCACATGAAAAGAGAGAGAGAAAATAATATTATTGGTGGAGTGAGTGAAGAAGGTCAAAGGGAGAAGTTGCCAAATCCATTTCAGGCTGCTCTAGCATCAGCTCTAGCATTTTCTGTTGGTGCAGTGGTGCCACTGCTAGCAGCTGCATTCATAAGGAGCCATAAAATCAGGCTTGCAGTTGTTGTTATTGTGGCTAGCCTCACATTGGTGGTATTTGGTGGAGTAGGAGCTGTGCTTGGAAAAACTCCACTCACCAAGTCTTGCCTTAGAATGCTCATTGGAGGTTGGTTGGCTATGACTATTACATTTGGCCTCACCAAGTTATTTGCCTTTGCGGAGCAAATTATTACTCATAAACCTGGATGA 699 0.4349 MASLDGHNTNETSFNHVEIPVHAVGVEPKPNQEIEERNIDYSQRANWLRAAVLGANDGLISVASLMMGVGAVKENITAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAHMKRERENNIIGGVSEEGQREKLPNPFQAALASALAFSVGAVVPLLAAAFIRSHKIRLAVVVIVASLTLVVFGGVGAVLGKTPLTKSCLRMLIGGWLAMTITFGLTKLFAFAEQIITHKPG* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1173 232 CDD Nodulin-21 47 194 - -
Pvu2g1173 232 Pfam VIT family 130 217 IPR008217 GO:0005384|GO:0030026
Pvu2g1173 232 Pfam VIT family 48 118 IPR008217 GO:0005384|GO:0030026
Pvu2g1173 232 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 221 IPR008217 GO:0005384|GO:0030026
Pvu2g1173 232 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1173 Pvu-Chr2 23134246 23135022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1173 32 219 Nodulin-like Gene Family AT3G43660 65.426 2.54e-87 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1173 K22736 - gmx:100817158 335.88