Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1163 ATGACGACAACAACAGCAACGTTTGATGTCTCCGCCGCTTGTTTCCGTGTCCCTCCCTCTTGTTCTCCTCGTTTTTCACCCAATCTGTGCCGCACCAGGTTTTCAGTTCTGAACTCCATGAATCCTCATAGGGGACGAATAAACGTGAACGTTCCACAACCCAAGTTTCCAAACTTCCGGAGGGAAGTTGCACTGAAGGGGACTTTGGAGGCTGTTGTTCCAACTTCTGTGCCTGTGCGTGTAGCATACGAGCTTCTTCTAGCTGGTCATAGATATTTGGATGTGAGGACCACGGAAGAGTTCGTTGAAGGACACGTTCCTGGCGCAATTAACATACCTTTCATGTTCAGAGTTGGATCAGGGATGACGAAGAACAGCAACTTCATTAGAGAGGTGTCCTCAAATTTCAGAAAAGATGATGAAATTATAGTTGGGTGCCAGCTTGGTAAAAGATCTATCATGGCTGCAAGTGACTTGCTAGCTGCTGGGTTCACAGGAATCACAGACATGGCTGGTGGTTTTGAAGCTTGGACACAAAATGGACTTCCAACAGAACGATGA 561 0.4688 MTTTTATFDVSAACFRVPPSCSPRFSPNLCRTRFSVLNSMNPHRGRINVNVPQPKFPNFRREVALKGTLEAVVPTSVPVRVAYELLLAGHRYLDVRTTEEFVEGHVPGAINIPFMFRVGSGMTKNSNFIREVSSNFRKDDEIIVGCQLGKRSIMAASDLLAAGFTGITDMAGGFEAWTQNGLPTER* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1163 186 SMART rhod_4 76 183 IPR001763 -
Pvu2g1163 186 Pfam Rhodanese-like domain 92 179 IPR001763 -
Pvu2g1163 186 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 185 - -
Pvu2g1163 186 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 185 IPR036873 -
Pvu2g1163 186 Gene3D - 64 185 IPR036873 -
Pvu2g1163 186 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 185 - -
Pvu2g1163 186 ProSitePatterns Rhodanese signature 1. 101 112 IPR001307 GO:0004792
Pvu2g1163 186 CDD RHOD 93 177 - -
Pvu2g1163 186 ProSiteProfiles Rhodanese domain profile. 86 186 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1163 Pvu-Chr2 22944170 22946668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1163 76 183 Sulfurtransferasese or Rhodanese AT5G66170 44.545 1.29e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1163 - - gmx:100499831 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1163 2 22944170 22946668 Pvu3g2719 3 49145190 49147687 PCT