Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1156 ATGGATTGGTTTCTAAAATCATCCGAAGCCATGTCCAACCTAAATCCATTCAACATGGCCATCTTACTCATCCTCCCACTAACAACACTTCTCTTGGTTTTGCTACATCGTACTCGTCGAAGAGCACCTTATCCGCCGGGACCAAAGGGGTTACCAATCATAGGAAACATGTTGATGATGGACCAGCTAACCCACCGCGGTCTCGCCACCCTTGCCAAGCAATACGGCGGTCTTTTCCACCTCCGCATGGGCTTCCTCCACATGGTCGCCATCTCCGACCCCGAGACGGCGCGTCAGGTTCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGTGCCGACATGGCCTTCGCACACTACGGTCCCTTCTGGCGCCAGATGCGCAAGCTCTGCGTTATGAAACTCTTCAGCCGCAAGCGCGCCGAGTCCTGGCAGTCCGTGCGCGACGAGGTCGACGCTGCAGTCCGCACCGTCGCCAATTCCGCCGGTAAAACTGTCAACATCGGTGAGCTCGTGTTCAACCTTACGAAAAACATCATCTACCGTGCGGCCTTCGGGTCGACCTCGCAGGAGGGCCAGGACGAGTTCATTGGGATTCTACAGGAGTTTTCGAAACTCTTTGGCGCTTTCAACATCGCAGACTTTATACCCTACCTCGGGCGCGTGGACCCTCAGGGACTCAACGCGCGCCTCGCTAGGGCTCGCGGCGCGTTGGATAGTTTCATTGATAAGATCATCGAGGAGCATGTACAGAAGAAAAAGAATGGGAATGGTGTCTGTGATGGAGAAACAGACATGGTGGATGAGTTGCTCGCCTTCTACACCGAAGAGGCCAAGTTGAACAATGAACCTGAGGATTTCCAAAACTCTATCAGACTCACTAAGGATAACATCAAAGCTATCATTATGGATGTGATGTTTGGAGGGACGGAAACGGTGGCATCAGCAATTGAGTGGGCCATGGCGGAGTTAATGAGAAGCCCAGAAGACCAAAAGAGGGTCCAACAGGAGCTGGCGGATGTAGTGGGCCTGGACCGTCGGGTTGAAGAATCCGATTTCGAGAAACTCACATTCCTAAAATGTACCCTCAAAGAGACCCTACGCCTCCACCCTCCGATCCCGCTCCTCCTCCACGAAACGGCGGAGGAAACGACGGTCGGCGGTTACTTCATCCCCAAGAAGGCGCGCGTGATGATCAACGCGTGGGCCATTGGGAGGGACAAAAACTGCTGGGAGGAACCGGAAACATTCAAACCCGCCCGATTTCTGGAACCGGGCGTGCCCGACTTCAAGGGGAGCAACTTCGAGTTTATTCCATTCGGGTCGGGTCGAAGGTCCTGCCCCGGGATGCAGTTGGGACTGTACGCGCTTGAATCGGCGGTGGCTCACCTCCTCCACTGCTTCACGTGGGAATTGCCAGATGGAATGAAACCCAGTGAGTTGGACATGGGTGACGTGTTCGGACTCACCGCTCCGAAAGCCACGCGACTCCTTGCTGTGCCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAG 1569 0.55 MDWFLKSSEAMSNLNPFNMAILLILPLTTLLLVLLHRTRRRAPYPPGPKGLPIIGNMLMMDQLTHRGLATLAKQYGGLFHLRMGFLHMVAISDPETARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVRTVANSAGKTVNIGELVFNLTKNIIYRAAFGSTSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLARARGALDSFIDKIIEEHVQKKKNGNGVCDGETDMVDELLAFYTEEAKLNNEPEDFQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTFLKCTLKETLRLHPPIPLLLHETAEETTVGGYFIPKKARVMINAWAIGRDKNCWEEPETFKPARFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALESAVAHLLHCFTWELPDGMKPSELDMGDVFGLTAPKATRLLAVPTKRVVCPLF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1156 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Pvu2g1156 522 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 SUPERFAMILY Cytochrome P450 45 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 Pfam Cytochrome P450 45 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1156 522 PANTHER CYTOCHROME P450 84A1-RELATED 8 522 - -
Pvu2g1156 522 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 8 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1156 Pvu-Chr2 22774390 22777865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1156 52 521 Monolignol Biosynthesis Gene Families AT4G36220 78.647 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1156 K09755 - gmx:100793538 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1156 2 22774390 22777865 Pvu3g2668 3 48735535 48738577 PCT
Pvu3g2667 3 48722977 48725970 Pvu2g1156 2 22774390 22777865 PCT