Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1147 ATGCCTGTTCTTCTTCTCCTACTGCTGTTCTGCGCACCCCTCTTAACGTGCGCCGATCGCAGTGCCGTTACTGTTGTGGAGATCCAAGCCTTGACGTCTTTCAAGCTCAACCTTCACGACCCCGTCGGAGCTCTCGACGGTTGGGATCCAACGTCGCCGGCGGCACCCTGCGACTGGCGGGGAGTAGCCTGCACCAATAGCCGAGTTACGGAGTTGCGCCTGCCTCGCCTTCAACTGGGTGGCAGACTCAGTGAGCGTGTCTCCGAGTTGCGCATGTTACGCAAGATAAGTCTTCGTTCCAACAACTTCAACGGAACCATTCCTTCGTCCCTCTCCAAATGCACGCTCTTATGGTCATTGTTCCTTCAGGATAACTCGTTTTCCGGCAACCTTCCGACGGAGATCGCGAACCTCACCGGCCTTAAGATTCTCAACGTCGCGCTAAACCGCCTCTCCGGCAGTATCCCCGGCATTCTCCCTCTCGGCCTCAAAGCCCTCGACCTCTCGTCGAACGCCTTCTCCGGCGCGATTCCGAGCTCCATAGCGAACCTATATCAGCTTCAGTTGATAAACCTGTCGTATAACCATTTTTCCGGCGAGATCCCGGCGAGCCTCGGGGAGCTTCAGCAGCTGCAGTACCTCTGGCTGGACCACAATCTCCTCGGAGGAACGCTTCCTTCGGCGCTCGCAAATTGCTCCGCGCTTCTGCATCTGAGCGTGGAAGGAAACGCGCTTACCGGCGAGATTCCGTCGGCGATTTCGGTGCTCCCGAAACTTCAGGTGATGTCGCTCTCTCAGAATAATTTCACCGGCTCCATTCCAGCTTCCATTTTGTGCAACGGTTCGGTTCACGCGCCGTCGCTGCGGATTGTTCACCTCAGTTTCAACGGATTCGTTGATTTCGTGGGACCTGGGATGAGCACGTGTATCAGTGTTCTTCAGGTTTTGGATATTCAGCACAATCGCATACGAGGCACGTTCCCGTTGTGGTTGACCAACGTGACTACGTTAACCGTGCTTGATGTGTCGAACAATGCACTTTTTGGGGAGGTTCCGCCTCAAATAGGAAACCTTGTGAAGTTGGAGGTTTTAAAGATGGCTAATAATTCCTTCACCGGTACCATTCCAGTAGAACTGAAGAAATGTGGGTTCCTAAGTGTCGTTGACTTTGAAGGCAACGAGTTTGGCGGAGAAGTTCCTTCGTTTTTGGGTGATGTGACGGGGCTGAGGGTGCTATCTCTCGGTGGGAACCACTTCTCTGGTTCTGTTCCGGTGAGTTTTGGAAACCTTTCATTTCTTGAAATGTTGAGTTTGAGAGGTAACAGGTTGAATGGAAGTATGCCTGAGATGATAATGAGATTGAACAATTTGACGATACTGGATCTTAGTGGAAACAAATTTACGGGTCAAGTTTATGCGAGTATTGGGAATTTGAATAAGTTGATGTTTCTCAATCTTAGTGGCAATGGCTTCTCTGGAAAAATTCCTTCTAGTTTGGGGAATCTTTTTAAGCTAACTACGCTTGACTTGAGCAAACAGAATCTTTCTGGAGAGTTACCGCTTGAGCTTTCGGGATTGCCCAGTTTGCAAGTTGTTGCACTGCAGGAAAACAAGTTATCTGGTGATGTGCCTGAAGGGTTTAGCAGTTTGACGAGTTTGCAGTATGTTAATCTCAGTTCTAATGCCTTTTCCGGGAATATTCCTGAAAATTATGGCTTTCTTCGTTCCTTGCTTGTTCTTTCGTTGTCTGATAATGACATAACAGGAGCAATCCCTTCGGAAATTGGAAACTGCTCTGGTATTGAAATTCTTGAGCTTGGATCAAACTCTCTGGCAGGTCGCATTCCTGCTGATCTCTCTCGTCTCACCCTTTTGAGAATGCTTGATTTGAGTGGAAACAATTTAACTGGGGACGTGCCTGCGGAAATCTCCAAATGCTCGGGGCTAACCACTTTGCTGGTGGATCACAACCGTCTTTCCGGGGATATTCCTGGGTCCTTGTGGAATCTACCTAACCTGACAATGCTAGATCTCTCTTCTAACAACTTGAGTGGGGAAATTCCTAGCAATCTTTCTATGATTCCCAGTCTAGTGTTCTTAAATGTCTCGGGAAATAACTTGGACGGTGAGATACCACCAACATTGGGATCTCGGTTCAGTAACCCCGATGTATTCGCAGATAATCCAGGTTTATGTGGGAAGCCATTGGATACGAAATGCGAAGATATAGATAATGGTAAGGACAGAAAGAGGATGATTGTGCTTGTGGTTGCCGTTGCTTGTGGAGCTTTTGTACTGGTTTTGTTTTGCTGCTTCTACGTGTTCAGTCTACTGAGATGGCGTAAAAGACTGAAACAAGGAGTATCGGGTGAAAAGAAAAAGAGTCCAGCCAGAGCCAGTTCTGGAACAAGTGGAGGTCGTAGCAGCAGCACTGAGAGTGGGGGACCAAAACTAGTGATGTTCAACACCAAAGTTACACTTGCTGAGACCATTGAAGCAACAAGACAATTTGACGAAGAGAACGTGCTGAGCAGAACAAGGTATGGATTAGTGTTCAAAGCCTGTTACAACGATGGAATGGTCCTTTCCATTCGCAGGCTCCAAGATGGATCATTGGATGAAAACATGTTTAGAAAAGAAGCCGAATCACTAGGCAAAGTGAAGCACCGAAATTTAATAGTTCTGAGAGGTTACTATGCTGGGCCACCTGACATGAGACTCCTAGTATACGATTACATGCCTAATGGAAACCTCGCAACCCTCCTCCAAGAAGCTTCTCACCAAGATGGCCACGTTCTAAATTGGCCAATGCGACACCTCATTGCACTGGGCATTGCCCGTGGTTTAGCCTTCCTACACCAGTCCTCAATGGTCCACGGCACCGTTAAACCACAAAATGTCCTATTCGATGCAGATTTCGAAGCCCATTTGTCAGATTTCGGGTTAGAAAAGTTAACAATAGCCACGACCCCAGGCGAAGCCTCAACTTCAGCATCCGTTGGCGCATTGGGTTACGTTTCTCCAGAAGCAGTCTTAACCGGGGAAGCCACAAAGGAGAGTGATGTTTACAGCTTTGGCATTGTGTTGTTGGAACTGCTGACTGGAAAACGACCCGTCATGTTCACCCAGGACGAAGACATAGTGAAGTGGGTAAAAAAACAACTGCAAAGGGGTCAAATAACAGAGCTATTAGAACCGGGTTTGCTTGAGTTGGACCCTGAATCATCAGAGTGGGAAGAGTTTTTACTGGGTGTAAAAGTTGGGTTACTTTGCACAGCACCCGACCCTCTTGATCGACCAACCATGTCTGACATTGTTTTCATGCTCGAAGGCTGCCGAGTTGGTCCTGATATCCCATCCTCTGCAGATCCCACCTCCCAACCTTCTCCGGTGTAA 3396 0.4826 MPVLLLLLLFCAPLLTCADRSAVTVVEIQALTSFKLNLHDPVGALDGWDPTSPAAPCDWRGVACTNSRVTELRLPRLQLGGRLSERVSELRMLRKISLRSNNFNGTIPSSLSKCTLLWSLFLQDNSFSGNLPTEIANLTGLKILNVALNRLSGSIPGILPLGLKALDLSSNAFSGAIPSSIANLYQLQLINLSYNHFSGEIPASLGELQQLQYLWLDHNLLGGTLPSALANCSALLHLSVEGNALTGEIPSAISVLPKLQVMSLSQNNFTGSIPASILCNGSVHAPSLRIVHLSFNGFVDFVGPGMSTCISVLQVLDIQHNRIRGTFPLWLTNVTTLTVLDVSNNALFGEVPPQIGNLVKLEVLKMANNSFTGTIPVELKKCGFLSVVDFEGNEFGGEVPSFLGDVTGLRVLSLGGNHFSGSVPVSFGNLSFLEMLSLRGNRLNGSMPEMIMRLNNLTILDLSGNKFTGQVYASIGNLNKLMFLNLSGNGFSGKIPSSLGNLFKLTTLDLSKQNLSGELPLELSGLPSLQVVALQENKLSGDVPEGFSSLTSLQYVNLSSNAFSGNIPENYGFLRSLLVLSLSDNDITGAIPSEIGNCSGIEILELGSNSLAGRIPADLSRLTLLRMLDLSGNNLTGDVPAEISKCSGLTTLLVDHNRLSGDIPGSLWNLPNLTMLDLSSNNLSGEIPSNLSMIPSLVFLNVSGNNLDGEIPPTLGSRFSNPDVFADNPGLCGKPLDTKCEDIDNGKDRKRMIVLVVAVACGAFVLVLFCCFYVFSLLRWRKRLKQGVSGEKKKSPARASSGTSGGRSSSTESGGPKLVMFNTKVTLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLIVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGTVKPQNVLFDADFEAHLSDFGLEKLTIATTPGEASTSASVGALGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPV* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1147 1131 SUPERFAMILY L domain-like 27 300 - -
Pvu2g1147 1131 Gene3D Phosphorylase Kinase; domain 1 806 912 - -
Pvu2g1147 1131 Gene3D Transferase(Phosphotransferase) domain 1 913 1117 - -
Pvu2g1147 1131 ProSiteProfiles Protein kinase domain profile. 837 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1147 1131 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Pvu2g1147 1131 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Pvu2g1147 1131 Pfam Leucine rich repeat 648 707 IPR001611 GO:0005515
Pvu2g1147 1131 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Pvu2g1147 1131 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Pvu2g1147 1131 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Pvu2g1147 1131 MobiDBLite consensus disorder prediction 796 817 - -
Pvu2g1147 1131 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1127 - -
Pvu2g1147 1131 SUPERFAMILY RNI-like 249 564 - -
Pvu2g1147 1131 PRINTS Leucine-rich repeat signature 625 638 - -
Pvu2g1147 1131 PRINTS Leucine-rich repeat signature 670 683 - -
Pvu2g1147 1131 Gene3D Ribonuclease Inhibitor 161 279 IPR032675 -
Pvu2g1147 1131 Gene3D Ribonuclease Inhibitor 25 160 IPR032675 -
Pvu2g1147 1131 SUPERFAMILY L domain-like 475 735 - -
Pvu2g1147 1131 SMART LRR_typ_2 670 701 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 622 646 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 574 598 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 430 453 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 90 114 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 256 280 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 526 549 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 478 502 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 454 477 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 208 232 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 406 429 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 334 358 IPR003591 -
Pvu2g1147 1131 SMART LRR_typ_2 138 161 IPR003591 -
Pvu2g1147 1131 SUPERFAMILY Protein kinase-like (PK-like) 817 1119 IPR011009 -
Pvu2g1147 1131 Gene3D Ribonuclease Inhibitor 474 748 IPR032675 -
Pvu2g1147 1131 SMART LRR_sd22_2 670 693 - -
Pvu2g1147 1131 SMART LRR_sd22_2 208 234 - -
Pvu2g1147 1131 SMART LRR_sd22_2 454 480 - -
Pvu2g1147 1131 SMART LRR_sd22_2 334 360 - -
Pvu2g1147 1131 SMART LRR_sd22_2 622 651 - -
Pvu2g1147 1131 Pfam Protein kinase domain 847 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g1147 1131 Gene3D Ribonuclease Inhibitor 280 473 IPR032675 -
Pvu2g1147 1131 MobiDBLite consensus disorder prediction 789 817 - -
Pvu2g1147 1131 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 4 1127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1147 Pvu-Chr2 22595673 22600360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1147 3 1131 Receptor kinase-like Gene Family AT4G36180 68.453 0.0 1482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pvu2g1147 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1147 - - gmx:100795838 1917.89