Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1142 ATGGTTCCTAGTGAGATAAGAGGAGTCAACTATCTAGCACCTGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTTCTGCAGAATGACATCCCAAACCTCCATCTGAACACCCTCCTAAGCAACTTTCCAAACTGCCACTTCCCTCCTTCAGGCCTTGAATTTGTTGCTCCTCACTCATGCCTCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATTCAGTTTAACATCATCGACGAAAGGAAGCACAGGAGAATGATATCCAACCGAGAATCCGCCCGCAGATCAAGGATGAGAAAGCAAAAGCACTTGGATGAACTGTGGTCACAGGTTGTTAGGCTCAGAACTGAGAACCACAACCTGATTGACAAACTCAACCATATGTCCGACTCCCATGACAGAGTCCTCCAAGAGAATACACGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCAGACATGCAAATTGGAACCTCCTTTGCTTGCACCATGGAGGAATTGGAGGACCTTCCCTGCAACAAACCTGGTCCCTCAAACCAATTAATCACTCCTGCAGACATGATTCATGAATGA 582 0.4656 MVPSEIRGVNYLAPENPFLVPPNFGLLQNDIPNLHLNTLLSNFPNCHFPPSGLEFVAPHSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSDSHDRVLQENTRLKEEASDLRQMLADMQIGTSFACTMEELEDLPCNKPGPSNQLITPADMIHE* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1142 193 Gene3D - 80 135 - -
Pvu2g1142 193 PANTHER BZIP PROTEIN (ATBZIP48) 1 176 - -
Pvu2g1142 193 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Pvu2g1142 193 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Pvu2g1142 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Pvu2g1142 193 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Pvu2g1142 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Pvu2g1142 193 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 176 IPR044521 -
Pvu2g1142 193 MobiDBLite consensus disorder prediction 174 193 - -
Pvu2g1142 193 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Pvu2g1142 193 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1142 Pvu-Chr2 22492109 22493173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1142 28 170 bZIP Transcription Factor Family AT3G30530 54.217 5.49e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu2g1142 bZIP_1 3.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1142 - - gmx:778126 355.91